RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 MGPP08493 103 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 SMIM17P0DL12 118 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 FOXA3P55318 350 aaPredicted RBP4.33□□□□□ -1.72
SEC22C-215ENST00000487701 FAM74A3Q4VXF1 159 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 WDR73Q6P4I2 378 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 PGLYRP4Q96LB8 373 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 SMDT1Q9H4I9 107 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 V9GYV3 84 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
SEC22C-215ENST00000487701 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 A8MWL6 223 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 M0QY20 66 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 IGHV3-30-3P0DP02 117 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 ADIRFQ15847 76 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 TMEM241Q24JQ0 296 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 TSKUQ8WUA8 353 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 DPH3P1Q9H4G8 78 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 NAT8Q9UHE5 227 aa4.32□□□□□ -1.72
SEC22C-215ENST00000487701 A0A087WWC5 75 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 TRAV26-2A0A0B4J265 109 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 HIGD1CA8MV81 97 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 RAB14P61106 215 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 CLLU1Q5K131 121 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 GFRA4Q9GZZ7 299 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
SEC22C-215ENST00000487701 TRAV9-2A0A087WT02 112 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 FAM231BA6NCW3 169 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 IBA57-AS1B1ANH7 110 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 K7EP13 123 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 RASL11AQ6T310 242 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 DAZ4Q86SG3 579 aaKnown RBP4.3□□□□□ -1.72
SEC22C-215ENST00000487701 NIT1Q86X76 327 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 C15orf54Q8N8G6 183 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 NUP35Q8NFH5 326 aa4.3□□□□□ -1.72
SEC22C-215ENST00000487701 DAZ3Q9NR90 486 aaKnown RBP4.3□□□□□ -1.72
SEC22C-215ENST00000487701 A0A1B0GUT8 65 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 SMIM27A0A1W2PRY6 76 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 H7C1H1 209 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 ADCYAP1P18509 176 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 MT3P25713 68 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 DEFB104AQ8WTQ1 72 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 RPL39LQ96EH5 51 aaKnown RBP4.29□□□□□ -1.72
SEC22C-215ENST00000487701 DNAJC30Q96LL9 226 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 Q9HAA7 133 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 NIT2Q9NQR4 276 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 NAT8BQ9UHF3 227 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 PAM16Q9Y3D7 125 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
SEC22C-215ENST00000487701 A0A087WTM6 91 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 IGLV5-52A0A0A0MRZ9 124 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
SEC22C-215ENST00000487701 LAGE3Q14657 143 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 IQCJQ1A5X6 159 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 MPV17L2Q567V2 206 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 SPATA12Q7Z6I5 190 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 AMN1Q8IY45 258 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 BORCS7Q96B45 105 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 RNF185Q96GF1 192 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 TMEM191AQ9H0A3 160 aa4.28□□□□□ -1.72
SEC22C-215ENST00000487701 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 A0A1B0GUV1 79 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 RAB4AP20338 218 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 RPS10P46783 165 aaKnown RBP4.27□□□□□ -1.73
SEC22C-215ENST00000487701 GAGE6Q13070 117 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 RIGQ13278 110 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 WFDC2Q14508 124 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 SMIM15Q7Z3B0 74 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 Q8N976 141 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 CHCHD7Q9BUK0 85 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
SEC22C-215ENST00000487701 A0A087WX48 190 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 A0A1B0GXF2 115 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 C16orf90A8MZG2 172 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 TMEM262E9PQX1 116 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 SMKR1H3BMG3 65 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 NCR2O95944 276 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 RBX1P62877 108 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 PNRC1Q12796 327 aaPredicted RBP4.26□□□□□ -1.73
SEC22C-215ENST00000487701 TMEM97Q5BJF2 176 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 MRPL54Q6P161 138 aaKnown RBP4.26□□□□□ -1.73
SEC22C-215ENST00000487701 ATRAIDQ6UW56 229 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
SEC22C-215ENST00000487701 COMMD7Q86VX2 200 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms