RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 DEFB121Q5J5C9 76 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 NAT14Q8WUY8 206 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 BET1LQ9NYM9 111 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 USF3Q68DE3 2245 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 DNAH8Q96JB1 4490 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 ERCC6Q03468 1493 aa-0.29□□□□□ -2.46
USP34-216ENST00000487547 TIAM2Q8IVF5 1701 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 TRAV12-2A0A075B6T6 113 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 PGRMC1O00264 195 aaKnown RBP-0.3□□□□□ -2.46
USP34-216ENST00000487547 UQCRQO14949 82 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 PYYP10082 97 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 RPL7P18124 248 aaKnown RBP-0.3□□□□□ -2.46
USP34-216ENST00000487547 RPL22P35268 128 aaKnown RBP-0.3□□□□□ -2.46
USP34-216ENST00000487547 PRO3102Q9H379 93 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 LRRC7Q96NW7 1537 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 NKTRP30414 1462 aaKnown RBP-0.3□□□□□ -2.46
USP34-216ENST00000487547 RAPGEF2Q9Y4G8 1499 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 C10orf71Q711Q0 1435 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 DNAH11Q96DT5 4516 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 DNAH9Q9NYC9 4486 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 DNAH17Q9UFH2 4485 aa-0.3□□□□□ -2.46
USP34-216ENST00000487547 TSC2P49815 1807 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 OR2H2O95918 312 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 SLC25A5P05141 298 aaKnown RBP-0.31□□□□□ -2.46
USP34-216ENST00000487547 RPS29P62273 56 aaKnown RBP-0.31□□□□□ -2.46
USP34-216ENST00000487547 Q5VV11 94 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 PPP1R2P3Q6NXS1 205 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 FDCSPQ8NFU4 85 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 VPS25Q9BRG1 176 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 BPESC1Q9GZL8 116 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.31□□□□□ -2.46
USP34-216ENST00000487547 TEX14Q8IWB6 1497 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 TRPM7Q96QT4 1865 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 SOGA1O94964 1423 aa-0.31□□□□□ -2.46
USP34-216ENST00000487547 RGPD8O14715 1765 aaPredicted RBP-0.32□□□□□ -2.46
USP34-216ENST00000487547 RGPD5Q99666 1765 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 TANC2Q9HCD6 1990 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 DNAH10Q8IVF4 4471 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 K7EP34 96 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 MT1AP04731 61 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 PSPHP78330 225 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 MT1XP80297 61 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 INSL4Q14641 139 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 DEFB112Q30KQ8 113 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 GOLGA4Q13439 2230 aaKnown RBP-0.32□□□□□ -2.46
USP34-216ENST00000487547 ZNF236Q9UL36 1845 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 SHROOM2Q13796 1616 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 ATG2AQ2TAZ0 1938 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 MYH2Q9UKX2 1941 aa-0.32□□□□□ -2.46
USP34-216ENST00000487547 ANKRD31Q8N7Z5 1873 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 ZNF831Q5JPB2 1677 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 USP32Q8NFA0 1604 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 TCRAP04437 139 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 COX6B1P14854 86 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 HIST1H1BP16401 226 aaKnown RBP-0.33□□□□□ -2.46
USP34-216ENST00000487547 ELOF1P60002 83 aaKnown RBP-0.33□□□□□ -2.46
USP34-216ENST00000487547 OR9Q1Q8NGQ5 310 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 PPDPFLQ8WWR9 84 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 CCDC115Q96NT0 180 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 PTPRGP23470 1445 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 TANC1Q9C0D5 1861 aa-0.33□□□□□ -2.46
USP34-216ENST00000487547 AFDNP55196 1824 aaKnown RBP-0.34□□□□□ -2.46
USP34-216ENST00000487547 PXDNQ92626 1479 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 PTPN23Q9H3S7 1636 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 NINQ8N4C6 2090 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 TCRBV3S1A0A5B6 114 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 NMBP08949 121 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 AKR1D1P51857 326 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 EMX2Q04743 252 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 SAMD13Q5VXD3 122 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 TMEM35BQ8NCS4 154 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 METTL1Q9UBP6 276 aaKnown RBP-0.34□□□□□ -2.46
USP34-216ENST00000487547 PLXNA1Q9UIW2 1896 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 CUX1P39880 1505 aa-0.34□□□□□ -2.46
USP34-216ENST00000487547 CC2D2AQ9P2K1 1620 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 MAP3K4Q9Y6R4 1608 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 MRC1P22897 1456 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 RALGAPBQ86X10 1494 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 ARHGAP35Q9NRY4 1499 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 SHANK2Q9UPX8 1470 aa-0.35□□□□□ -2.46
USP34-216ENST00000487547 NUP210Q8TEM1 1887 aaPredicted RBP-0.35□□□□□ -2.46
USP34-216ENST00000487547 CHD1O14646 1710 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 ADGRB1O14514 1584 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 UNC13BO14795 1591 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.35□□□□□ -2.47
USP34-216ENST00000487547 XIRP1Q702N8 1843 aaKnown RBP-0.35□□□□□ -2.47
USP34-216ENST00000487547 A0A1B0GV72 72 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 DEFB1P60022 68 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 PLGLB1Q02325 96 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 HSD17B12Q53GQ0 312 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 SLC25A26Q70HW3 274 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 SLC35B3Q9H1N7 401 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 CENPHQ9H3R5 247 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 TAS2R8Q9NYW2 309 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 CALML5Q9NZT1 146 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 NDUFAF1Q9Y375 327 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 RIMS1Q86UR5 1692 aaKnown RBP-0.35□□□□□ -2.47
USP34-216ENST00000487547 WDR97A6NE52 1622 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 TOP2BQ02880 1626 aa-0.35□□□□□ -2.47
USP34-216ENST00000487547 PTPRMP28827 1452 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms