RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SPTSSAQ969W0 71 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 NPCDR1Q9BY65 106 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 RNASE7Q9H1E1 156 aaKnown RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 C11orf68Q9H3H3 251 aaKnown RBP1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 C11orf1Q9H5F2 150 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 LCTP09848 1927 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 PTPRDP23468 1912 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 DOCK4Q8N1I0 1966 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TRPM6Q9BX84 2022 aa1.54□□□□□ -2.16
SNRNP27-204ENST00000487029 TRBV19A0A075B6N1 114 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 TRBV25-1A0A075B6N4 114 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 TRAV26-2A0A0B4J265 109 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 A0A1B0GUT8 65 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 hADV29S1A0JD25 119 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 RBAKDNA6NC62 111 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 HIGD1CA8MV81 97 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 OOSP1A8MZH6 123 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 H3BSH0 61 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 K7EMI3 77 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 UBE2L6O14933 153 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 PPP1R17O96001 155 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 TCRAP04437 139 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 IGHV3-30-3P0DP02 117 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 FGF6P10767 208 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 CKS2P33552 79 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 FXYD2P54710 66 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 EDDM3BP56851 147 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 FXYD3Q14802 87 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 KISS1Q15726 138 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 DOCK11Q5JSL3 2073 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 C2orf82Q6UX34 121 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 Q6ZRU5 148 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 FANCMQ8IYD8 2048 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 C1orf158Q8N1D5 194 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 SERP2Q8N6R1 65 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 DYNLRB2Q8TF09 96 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 KLK6Q92876 244 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 LINC01600Q96MT4 127 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 WFDC6Q9BQY6 131 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 PRO1854Q9UHT4 67 aa1.53□□□□□ -2.16
SNRNP27-204ENST00000487029 MED12LQ86YW9 2145 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 SCN10AQ9Y5Y9 1956 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 MGAMO43451 1857 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 TRGV5A0A0B4J1U4 118 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 TRAV12-1A0A0B4J245 112 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 IGHV1-58A0A0C4DH39 117 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 PGLYRP1O75594 196 aaPredicted RBP1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 CCL1P22362 96 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 FKBP2P26885 142 aaKnown RBP1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 IFI27P40305 119 aaPredicted RBP1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 SPINT3P49223 89 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 INSL3P51460 131 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 DSCR4P56555 118 aaPredicted RBP1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 UBE2D3P61077 147 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 DAD1P61803 113 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 UBE2D2P62837 147 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 MRPL51Q4U2R6 128 aaKnown RBP1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 ATP5EP2Q5VTU8 51 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 C10orf105Q8TEF2 133 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 CARD19Q96LW7 228 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 TP73-AS1Q9UF72 201 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 COL18A1P39060 1754 aa1.52□□□□□ -2.17
SNRNP27-204ENST00000487029 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 TRAV3A0A0B4J244 114 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 TRBV7-6A0A0J9YX20 115 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 ZNF815PA8K554 130 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 K7ERJ3 54 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 M0R135 149 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 CCL16O15467 120 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 TCL1BO95988 128 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 DNAL4O96015 105 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 NPPCP23582 126 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 UBE2D1P51668 147 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 LINC00313P59037 77 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 FGF12P61328 243 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 UBE2BP63146 152 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 RBM3P98179 157 aaKnown RBP1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 TFF3Q07654 80 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 FAM229BQ4G0N7 80 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 DEFB121Q5J5C9 76 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 MIC13Q5XKP0 118 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 ZNF818PQ6ZRF7 136 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 C5orf38Q86SI9 138 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 NDUFA11Q86Y39 141 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 PRR15Q8IV56 129 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 Q8IYB0 196 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 ZC2HC1AQ96GY0 325 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 NABP2Q9BQ15 211 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 UPK3BQ9BT76 320 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 DPH3P1Q9H4G8 78 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 KIAA1549LQ6ZVL6 1849 aa1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 MDC1Q14676 2089 aaKnown RBP1.51□□□□□ -2.17
SNRNP27-204ENST00000487029 KIAA1549Q9HCM3 1950 aa1.5□□□□□ -2.17
SNRNP27-204ENST00000487029 MYO9BQ13459 2157 aa1.5□□□□□ -2.17
SNRNP27-204ENST00000487029 TNS1Q9HBL0 1735 aaKnown RBP1.5□□□□□ -2.17
SNRNP27-204ENST00000487029 TRBV20OR9-2A0A075B6H5 130 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms