RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 BAGE3Q86Y29 109 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 TCEAL4Q96EI5 215 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 PFDN5Q99471 154 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 CYP4F30PQ9H0H9 118 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 PRO0255Q9UI72 69 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 IFT140Q96RY7 1462 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 KDM3BQ7LBC6 1761 aa-0.11□□□□□ -2.43
LTN1-206ENST00000486427 NHSL1Q5SYE7 1610 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 C2CD3Q4AC94 2353 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 MACF1Q9UPN3 7388 aaKnown RBP-0.12□□□□□ -2.43
LTN1-206ENST00000486427 SIX6O95475 246 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 PPP1R17O96001 155 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 CFDP00746 253 aaPredicted RBP-0.12□□□□□ -2.43
LTN1-206ENST00000486427 SPINK8P0C7L1 97 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 CCL18P55774 89 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 ARPC4P59998 168 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 AGPAT4-IT1Q9H0P7 198 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 NPVFQ9HCQ7 196 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 SCN3BQ9NY72 215 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 CCDC167Q9P0B6 97 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 PLCE1Q9P212 2302 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 MRC1P22897 1456 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 LPAP08519 4548 aa-0.12□□□□□ -2.43
LTN1-206ENST00000486427 ZNF609O15014 1411 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 KMT2AQ03164 3969 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 TRAV13-2A0A0B4J235 113 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 SPAARA0A1B0GVQ0 90 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 M0R135 149 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 NDUFA2O43678 99 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 GNG7O60262 68 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 SMIM6P0DI80 62 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 C10orf128Q5T292 105 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 Q8N8P6 123 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 CNFNQ9BYD5 112 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 AKAP6Q13023 2319 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 PI4KAP42356 2102 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 LRP6O75581 1613 aa-0.13□□□□□ -2.43
LTN1-206ENST00000486427 CFTRP13569 1480 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 PKD1L1Q8TDX9 2849 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 A0A0D9SFI3 127 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 M0R3E3 92 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 PIN1P1O15428 100 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 BCE1O60756 84 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 HAMPP81172 84 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 LINC00470Q9BZP3 86 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 PAIP2BQ9ULR5 123 aaKnown RBP-0.14□□□□□ -2.43
LTN1-206ENST00000486427 R4GMQ9 66 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 DOPEY2Q9Y3R5 2298 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 ALMS1Q8TCU4 4167 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 VWFP04275 2813 aa-0.14□□□□□ -2.43
LTN1-206ENST00000486427 PPRC1Q5VV67 1664 aaKnown RBP-0.14□□□□□ -2.43
LTN1-206ENST00000486427 CHD6Q8TD26 2715 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 PSME4Q14997 1843 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 CTXND1A0A1B0GTU2 59 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 C10orf142B7Z368 130 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 LRP2P98164 4655 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 SPAG11BQ08648 103 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 WFDC2Q14508 124 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 CCDC58Q4VC31 144 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 MEIG1Q5JSS6 88 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 Q6AWC8 147 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 SPAG11AQ6PDA7 123 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 TTC9CQ8N5M4 171 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 ARL11Q969Q4 196 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 AQP10Q96PS8 301 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 RERGLQ9H628 205 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 SERP1Q9Y6X1 66 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 CSMD3Q7Z407 3707 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 PKDREJQ9NTG1 2253 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 NSD1Q96L73 2696 aaPredicted RBP-0.15□□□□□ -2.43
LTN1-206ENST00000486427 PTPN13Q12923 2485 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 USF3Q68DE3 2245 aa-0.15□□□□□ -2.43
LTN1-206ENST00000486427 MBD5Q9P267 1494 aa-0.16□□□□□ -2.43
LTN1-206ENST00000486427 SHROOM2Q13796 1616 aa-0.16□□□□□ -2.43
LTN1-206ENST00000486427 KIF21AQ7Z4S6 1674 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 TRAV22A0A0B4J277 110 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 LOC100130705A0A1B0GUX0 176 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 FAM25AB3EWG3 89 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 FAM25CB3EWG5 89 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 FAM25GB3EWG6 89 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 SELENOWP63302 87 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 DEFB109BQ30KR1 87 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 TSLPQ969D9 159 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 SNRNP25Q9BV90 132 aaKnown RBP-0.16□□□□□ -2.44
LTN1-206ENST00000486427 FAM107BQ9H098 131 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 LENEPQ9Y5L5 61 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 SBF2Q86WG5 1849 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 PPIP5K1Q6PFW1 1433 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 LRRC37A2A6NM11 1700 aa-0.16□□□□□ -2.44
LTN1-206ENST00000486427 ROBO1Q9Y6N7 1651 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 ERCC6L2Q5T890 1561 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 C12orf73Q69YU5 71 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 Q8IZM0 81 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 COPS9Q8WXC6 57 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 AMELXQ99217 191 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 NAA60Q9H7X0 242 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 LINC00472Q9H8W2 130 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 SPCS1Q9Y6A9 102 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms