RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 NPYP01303 97 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 CKS2P33552 79 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 FAM74A4Q5TZK3 123 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 PRELID3AQ96N28 172 aa6.69□□□□□ -1.34
SND1-213ENST00000486037 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 GAGE7O76087 117 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 GAGE12FP0CL80 117 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 GAGE12GP0CL81 117 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 GAGE12IP0CL82 117 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 SMIM17P0DL12 118 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 LINC00310P59036 64 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 Q0VG73 95 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 OR10J3Q5JRS4 329 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
SND1-213ENST00000486037 SUMO4Q6EEV6 95 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 ORMDL3Q8N138 153 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 LINC00612Q8N6U2 182 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 NRACQ8N912 160 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
SND1-213ENST00000486037 IGHV3-73A0A0B4J1V6 119 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 C5orf52A6NGY3 159 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 NUPR1O60356 82 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 PPBPP02775 128 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 GCSHP23434 173 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
SND1-213ENST00000486037 ZNF56Q15929 161 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 RPL39LQ96EH5 51 aaKnown RBP6.67□□□□□ -1.34
SND1-213ENST00000486037 URB1-AS1Q96HZ7 61 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
SND1-213ENST00000486037 A0A087WTM6 91 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 F5H697 171 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 SERF1AO75920 110 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 TNFRSF6BO95407 300 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 S100A6P06703 90 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 ESRGQ1W209 222 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 BAGE3Q86Y29 109 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 OR4C5Q8NGB2 326 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 DEFB104AQ8WTQ1 72 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 ZNF479Q96JC4 524 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
SND1-213ENST00000486037 LOC389332A0A1B0GUA5 103 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 LYRM9A8MSI8 78 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 M0QY20 66 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 RHODO00212 210 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 HOXA5P20719 270 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 NIT1Q86X76 327 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 HIST3H2BBQ8N257 126 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 LAMTOR2Q9Y2Q5 125 aa6.65□□□□□ -1.34
SND1-213ENST00000486037 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
SND1-213ENST00000486037 IFI27P40305 119 aaPredicted RBP6.64□□□□□ -1.35
SND1-213ENST00000486037 MAP1LC3AQ9H492 121 aa6.64□□□□□ -1.35
SND1-213ENST00000486037 Q9UF83 564 aa6.64□□□□□ -1.35
SND1-213ENST00000486037 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 TRBV6-5A0A0K0K1A5 114 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 IFITM10A6NMD0 228 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 ESDP10768 282 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
SND1-213ENST00000486037 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 RNASEKQ6P5S7 137 aaKnown RBP6.63□□□□□ -1.35
SND1-213ENST00000486037 TMEM70Q9BUB7 260 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
SND1-213ENST00000486037 MRPS16Q9Y3D3 137 aaKnown RBP6.63□□□□□ -1.35
SND1-213ENST00000486037 A0A0J9YY99 117 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
SND1-213ENST00000486037 ATP5G1P05496 136 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 LINC00614P0C842 121 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 SUMO2P61956 95 aaKnown RBP6.62□□□□□ -1.35
SND1-213ENST00000486037 FHL2Q14192 279 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 Q8N8P6 123 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 PRSS3P2Q8NHM4 247 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 C20orf78Q9BR46 151 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 ST20Q9HBF5 79 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 NIT2Q9NQR4 276 aa6.62□□□□□ -1.35
SND1-213ENST00000486037 LINC01546A6NGU7 62 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 H7C1H1 209 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 CIDEAO60543 219 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 PPP1R17O96001 155 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 OXTP01178 125 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 POLR2KP53803 58 aaKnown RBP6.61□□□□□ -1.35
SND1-213ENST00000486037 FA2HQ7L5A8 372 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 SLC25A29Q8N8R3 303 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
SND1-213ENST00000486037 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
SND1-213ENST00000486037 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
SND1-213ENST00000486037 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
SND1-213ENST00000486037 SDHAF1A6NFY7 115 aa6.6□□□□□ -1.35
SND1-213ENST00000486037 K7EQD1 137 aa6.6□□□□□ -1.35
SND1-213ENST00000486037 HSBP1O75506 76 aa6.6□□□□□ -1.35
SND1-213ENST00000486037 PMCHP20382 165 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms