RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 NCR2O95944 276 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 HLA-DQA1P01909 254 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 IGLC6P0CF74 106 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 NTF3P20783 257 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 TWIST1Q15672 202 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
CPNE1-226ENST00000486021 DEFB104AQ8WTQ1 72 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 TMEM243Q9BU79 118 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 SMDT1Q9H4I9 107 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 RPP21Q9H633 154 aaKnown RBP4.95□□□□□ -1.62
CPNE1-226ENST00000486021 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
CPNE1-226ENST00000486021 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 PPP1R2P9O14990 202 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 PPP1R17O96001 155 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
CPNE1-226ENST00000486021 RAB5AP20339 215 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 DDTP30046 118 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 MPV17L2Q567V2 206 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 AMMECR1LQ6DCA0 310 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 LYZL1Q6UWQ5 148 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 CBLN2Q8IUK8 224 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 NUDT10Q8NFP7 164 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 NUDT11Q96G61 164 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 BTF3L4Q96K17 158 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 EIF5A2Q9GZV4 153 aaKnown RBP4.94□□□□□ -1.62
CPNE1-226ENST00000486021 RPS10P5Q9NQ39 176 aa4.94□□□□□ -1.62
CPNE1-226ENST00000486021 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 COLCA2A8K830 154 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 M0QY20 66 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 LECT2O14960 151 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 PCP4P48539 62 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 AMTP48728 403 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 REG3AQ06141 175 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 GAGE6Q13070 117 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 ANKRD39Q53RE8 183 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 TMEM101Q96IK0 257 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 KIF25-AS1Q9Y6Z4 181 aa4.93□□□□□ -1.62
CPNE1-226ENST00000486021 FAM231BA6NCW3 169 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 J3QL48 77 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 IGLV2-8P01709 118 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 LINC00614P0C842 121 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
CPNE1-226ENST00000486021 FUSP35637 526 aaKnown RBP eCLIP4.92□□□□□ -1.62
CPNE1-226ENST00000486021 CTRLP40313 264 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 RBX1P62877 108 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 CT83Q5H943 113 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 ENHOQ6UWT2 76 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 Q6ZSA8 131 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 FAM231DQ6ZW35 169 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 LINC00269Q8N2A0 174 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 CHAC1Q9BUX1 264 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 CNFNQ9BYD5 112 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 GFRA4Q9GZZ7 299 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 Q9UF83 564 aa4.92□□□□□ -1.62
CPNE1-226ENST00000486021 A0A1B0GV90 55 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 APCSP02743 223 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 PMCHP20382 165 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 CEBPGP53567 150 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 LINC00528Q8N1L1 170 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 Q8N3U1 123 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 OCC1Q8TAD7 63 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 TMEM18Q96B42 140 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 C14orf144Q96I85 54 aa4.91□□□□□ -1.62
CPNE1-226ENST00000486021 ZNF727A8MUV8 499 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 I3L3M4 83 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 M0R143 59 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 RIGQ13278 110 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 RNASEKQ6P5S7 137 aaKnown RBP4.9□□□□□ -1.63
CPNE1-226ENST00000486021 NTM-AS1Q6ZSK4 140 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 C9orf163Q8N9P6 203 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 SMIM7Q9BQ49 75 aa4.9□□□□□ -1.63
CPNE1-226ENST00000486021 RNASE7Q9H1E1 156 aaKnown RBP4.9□□□□□ -1.63
CPNE1-226ENST00000486021 IGHV3-64A0A075B6Q5 118 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 A0A1B0GUT8 65 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 hDV102S1A0JD36 115 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 CCL25O15444 150 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 RPS10P46783 165 aaKnown RBP4.89□□□□□ -1.63
CPNE1-226ENST00000486021 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
CPNE1-226ENST00000486021 NDUFA6P56556 154 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 LYPD6BQ8NI32 183 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 TSKUQ8WUA8 353 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 MRAP2Q96G30 205 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 OSTCQ9NRP0 149 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 KIAA1109Q2LD37 5005 aa4.89□□□□□ -1.63
CPNE1-226ENST00000486021 HERC2O95714 4834 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 A0A1B0GW15 77 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 ADCYAP1P18509 176 aa4.88□□□□□ -1.63
CPNE1-226ENST00000486021 CNBPP62633 177 aaKnown RBP4.88□□□□□ -1.63
CPNE1-226ENST00000486021 WFDC2Q14508 124 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms