RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 AP1S3Q96PC3 154 aa3.8□□□□□ -1.8
CUX1-208ENST00000485792 SMIM7Q9BQ49 75 aa3.8□□□□□ -1.8
CUX1-208ENST00000485792 EIF5A2Q9GZV4 153 aaKnown RBP3.8□□□□□ -1.8
CUX1-208ENST00000485792 A0A087WTM6 91 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 ZNF727A8MUV8 499 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 TRGC1P0CF51 173 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 RPL23P62829 140 aaKnown RBP3.79□□□□□ -1.8
CUX1-208ENST00000485792 IQCJQ1A5X6 159 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 TMEM241Q24JQ0 296 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 SUMO4Q6EEV6 95 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 DAZ4Q86SG3 579 aaKnown RBP3.79□□□□□ -1.8
CUX1-208ENST00000485792 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 DPH3P1Q9H4G8 78 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 NIT2Q9NQR4 276 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
CUX1-208ENST00000485792 PRR34Q9NV39 138 aa3.79□□□□□ -1.8
CUX1-208ENST00000485792 HERC1Q15751 4861 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
CUX1-208ENST00000485792 TRBV6-5A0A0K0K1A5 114 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 A0A1B0GUV1 79 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 SMIM27A0A1W2PRY6 76 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
CUX1-208ENST00000485792 TMEM97Q5BJF2 176 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 OR10J3Q5JRS4 329 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 KRTAP26-1Q6PEX3 210 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 RASL11AQ6T310 242 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
CUX1-208ENST00000485792 TMEM191AQ9H0A3 160 aa3.78□□□□□ -1.8
CUX1-208ENST00000485792 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
CUX1-208ENST00000485792 TRAV8-3A0A0A6YYJ7 113 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 A0A1B0GUT8 65 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 HIGD1CA8MV81 97 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 H7C1H1 209 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 ADCYAP1P18509 176 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 POLR2KP53803 58 aaKnown RBP3.77□□□□□ -1.81
CUX1-208ENST00000485792 ERVFC1-1P60608 527 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 HAMPP81172 84 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 FOXI1Q12951 378 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 PEA15Q15121 130 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 ZNF56Q15929 161 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 CLLU1Q5K131 121 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 ENHOQ6UWT2 76 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 SPATA12Q7Z6I5 190 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 RNF185Q96GF1 192 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 NAT8Q9UHE5 227 aa3.77□□□□□ -1.81
CUX1-208ENST00000485792 TRBV24-1A0A075B6N3 115 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 TRAV26-2A0A0B4J265 109 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 TRBV27A0A0K0K1C4 114 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 IGHV3-30P01768 117 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 IGHV3-33P01772 117 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 SMIM17P0DL12 118 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 IGHV3-30-3P0DP02 117 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 IGHV3-30-5P0DP03 117 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 ESDP10768 282 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 RAB4AP20338 218 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 SSTP61278 116 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 TWIST1Q15672 202 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 MPV17L2Q567V2 206 aa3.76□□□□□ -1.81
CUX1-208ENST00000485792 NCR2O95944 276 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 RPS10P46783 165 aaKnown RBP3.75□□□□□ -1.81
CUX1-208ENST00000485792 XGP55808 180 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 PKIAP61925 76 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 RBX1P62877 108 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
CUX1-208ENST00000485792 Q0VG73 95 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 Q6ZSA8 131 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 Q8N814 137 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 C15orf54Q8N8G6 183 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 NRACQ8N912 160 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 FAM104AQ969W3 186 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
CUX1-208ENST00000485792 TPPP3Q9BW30 176 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 TM2D2Q9BX73 214 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 COX11Q9Y6N1 276 aa3.75□□□□□ -1.81
CUX1-208ENST00000485792 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 IGHV1-24A0A0C4DH33 117 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 A0A1B0GW15 77 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 LINC00862A6NCI5 91 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 SDHAF1A6NFY7 115 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 C16orf90A8MZG2 172 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 H7C423 109 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 CEBPGP53567 150 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 PNRC1Q12796 327 aaPredicted RBP3.74□□□□□ -1.81
CUX1-208ENST00000485792 ELOBQ15370 118 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 MIAQ16674 131 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 C10orf91Q5T1B1 145 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 Q8N976 141 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 MRAP2Q96G30 205 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 TMEM70Q9BUB7 260 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 NAT8BQ9UHF3 227 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 KLK12Q9UKR0 248 aa3.74□□□□□ -1.81
CUX1-208ENST00000485792 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
CUX1-208ENST00000485792 A0A087WX48 190 aa3.73□□□□□ -1.81
CUX1-208ENST00000485792 TSHBP01222 138 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms