RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
NDUFA3-213ENST00000484103 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
NDUFA3-213ENST00000484103 V9GYV3 84 aa12.55□□□□□ -0.4
NDUFA3-213ENST00000484103 J3QL48 77 aa12.54□□□□□ -0.4
NDUFA3-213ENST00000484103 PLA2G1BP04054 148 aaKnown RBP12.54□□□□□ -0.4
NDUFA3-213ENST00000484103 IGLC6P0CF74 106 aa12.54□□□□□ -0.4
NDUFA3-213ENST00000484103 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 USP17L23D6RBM5 183 aa12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 RBX1P62877 108 aa12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 SUMO4Q6EEV6 95 aa12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 LINC00269Q8N2A0 174 aa12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 DMBT1Q9UGM3 2413 aaPredicted RBP12.53□□□□□ -0.4
NDUFA3-213ENST00000484103 IGLV10-54A0A075B6I4 117 aa12.52□□□□□ -0.41
NDUFA3-213ENST00000484103 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
NDUFA3-213ENST00000484103 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
NDUFA3-213ENST00000484103 GTSF1Q8WW33 167 aa12.51□□□□□ -0.41
NDUFA3-213ENST00000484103 A8MWL6 223 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 M0QY20 66 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 PPP1R2P9O14990 202 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 CIRBP-AS1Q8TBR5 109 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 GFRA4Q9GZZ7 299 aa12.5□□□□□ -0.41
NDUFA3-213ENST00000484103 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 FAM231BA6NCW3 169 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 CTRLP40313 264 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 PKIAP61925 76 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 CACNG7P62955 275 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 TMEM97Q5BJF2 176 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 CLRN3Q8NCR9 226 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 ANAPC16Q96DE5 110 aa12.49□□□□□ -0.41
NDUFA3-213ENST00000484103 H7C1H1 209 aa12.48□□□□□ -0.41
NDUFA3-213ENST00000484103 APOC3P02656 99 aa12.48□□□□□ -0.41
NDUFA3-213ENST00000484103 MIAQ16674 131 aa12.48□□□□□ -0.41
NDUFA3-213ENST00000484103 SVBPQ8N300 66 aa12.48□□□□□ -0.41
NDUFA3-213ENST00000484103 PRSS1P07477 247 aa12.47□□□□□ -0.41
NDUFA3-213ENST00000484103 RHEBQ15382 184 aa12.47□□□□□ -0.41
NDUFA3-213ENST00000484103 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
NDUFA3-213ENST00000484103 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 F2Z2F3 143 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 NTF3P20783 257 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 TWIST1Q15672 202 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 IQCJQ1A5X6 159 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 RASL11AQ6T310 242 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
NDUFA3-213ENST00000484103 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 SNAPINO95295 136 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 TRGC1P0CF51 173 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 REG3AQ06141 175 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 WDR73Q6P4I2 378 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
NDUFA3-213ENST00000484103 IGLV4-60A0A075B6I1 120 aa12.44□□□□□ -0.42
NDUFA3-213ENST00000484103 TRAV26-2A0A0B4J265 109 aa12.44□□□□□ -0.42
NDUFA3-213ENST00000484103 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
NDUFA3-213ENST00000484103 IGKV3OR2-268A0A0C4DH90 116 aa12.43□□□□□ -0.42
NDUFA3-213ENST00000484103 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
NDUFA3-213ENST00000484103 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
NDUFA3-213ENST00000484103 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
NDUFA3-213ENST00000484103 NAT8BQ9UHF3 227 aa12.43□□□□□ -0.42
NDUFA3-213ENST00000484103 UBE2L6O14933 153 aa12.42□□□□□ -0.42
NDUFA3-213ENST00000484103 KRTAP26-1Q6PEX3 210 aa12.42□□□□□ -0.42
NDUFA3-213ENST00000484103 PGLYRP4Q96LB8 373 aa12.42□□□□□ -0.42
NDUFA3-213ENST00000484103 IMMP2LQ96T52 175 aa12.42□□□□□ -0.42
NDUFA3-213ENST00000484103 NIT2Q9NQR4 276 aa12.42□□□□□ -0.42
NDUFA3-213ENST00000484103 AMTP48728 403 aa12.41□□□□□ -0.42
NDUFA3-213ENST00000484103 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
NDUFA3-213ENST00000484103 RPS10P5Q9NQ39 176 aa12.4□□□□□ -0.42
NDUFA3-213ENST00000484103 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
NDUFA3-213ENST00000484103 COTL1Q14019 142 aa12.39□□□□□ -0.43
NDUFA3-213ENST00000484103 RPL39LQ96EH5 51 aaKnown RBP12.39□□□□□ -0.43
NDUFA3-213ENST00000484103 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.39□□□□□ -0.43
NDUFA3-213ENST00000484103 PANO1I0J062 215 aa12.38□□□□□ -0.43
NDUFA3-213ENST00000484103 KRTAP10-4P60372 401 aaPredicted RBP12.38□□□□□ -0.43
NDUFA3-213ENST00000484103 GATD1Q8NB37 220 aa12.38□□□□□ -0.43
NDUFA3-213ENST00000484103 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
NDUFA3-213ENST00000484103 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
NDUFA3-213ENST00000484103 BORCS7Q96B45 105 aa12.37□□□□□ -0.43
NDUFA3-213ENST00000484103 A0A1B0GXF2 115 aa12.36□□□□□ -0.43
NDUFA3-213ENST00000484103 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
NDUFA3-213ENST00000484103 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
NDUFA3-213ENST00000484103 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 TRAV9-1A0A075B6T8 112 aa12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 IGKV2-29A2NJV5 120 aaPredicted RBP12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 RIGQ13278 110 aa12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 ATP5L2Q7Z4Y8 100 aa12.35□□□□□ -0.43
NDUFA3-213ENST00000484103 A0A1B0GW15 77 aa12.34□□□□□ -0.43
NDUFA3-213ENST00000484103 GAGE12HA6NDE8 117 aa12.34□□□□□ -0.43
NDUFA3-213ENST00000484103 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
NDUFA3-213ENST00000484103 DPH3Q96FX2 82 aa12.34□□□□□ -0.43
NDUFA3-213ENST00000484103 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
NDUFA3-213ENST00000484103 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
NDUFA3-213ENST00000484103 TRAV8-4A0A0B4J246 113 aa12.33□□□□□ -0.44
NDUFA3-213ENST00000484103 A0A1B0GUV1 79 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms