RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.04
SEC61A1-205ENST00000483956 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.04
SEC61A1-205ENST00000483956 KMT2BQ9UMN6 2715 aaPredicted RBP8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 CCL21O00585 134 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 CDSNQ15517 529 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 LITAFQ99732 161 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 ADAMTSL4-AS1Q5T5F5 129 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
SEC61A1-205ENST00000483956 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 A0A087WW49 117 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 J3QLI3 93 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 ADORA2A-AS1P86434 159 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
SEC61A1-205ENST00000483956 EPG5Q9HCE0 2579 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 NDUFA4O00483 81 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 KLRB1Q12918 225 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 C10orf105Q8TEF2 133 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 KIF25-AS1Q9Y6Z4 181 aa8.56□□□□□ -1.04
SEC61A1-205ENST00000483956 LINC00315P59091 139 aa8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 MOB4Q9Y3A3 225 aa8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 A0A0J9YX75 114 aa8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 DAZ2Q13117 558 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 UNQ9165/PRO28630Q6UXU0 137 aa8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 DAZ1Q9NQZ3 744 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
SEC61A1-205ENST00000483956 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 TMEM61Q8N0U2 210 aa8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 F8WDY8 70 aa8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 PIMREGQ9BSJ6 248 aa8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
SEC61A1-205ENST00000483956 GNRH2O43555 120 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 IGHV3-30-3P0DP02 117 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 LMO4P61968 165 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 SERP2Q8N6R1 65 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 MALP21145 153 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 TIRAPP58753 221 aa8.53□□□□□ -1.04
SEC61A1-205ENST00000483956 PRRC2AP48634 2157 aaKnown RBP8.52□□□□□ -1.04
SEC61A1-205ENST00000483956 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 MUC4Q99102 2169 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 KLLNB2CW77 178 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 H3BUA1 57 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 VCYO14598 125 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 TRBV12-3P01733 135 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 DEFB1P60022 68 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
SEC61A1-205ENST00000483956 A0A087WVE0 104 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 MIAQ16674 131 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 PKD1L2Q7Z442 2459 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 IGKV3D-7A0A0C4DH55 119 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 A0A1W2PPR1 153 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 PFN2P35080 140 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 SUMO4Q6EEV6 95 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 TRBV6-5A0A0K0K1A5 114 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 DAND5Q8N907 189 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
SEC61A1-205ENST00000483956 CENPEQ02224 2701 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 F6UB75 175 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 IGHV3OR16-10A0A075B7F0 116 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 A8MZ25 164 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
SEC61A1-205ENST00000483956 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
SEC61A1-205ENST00000483956 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
SEC61A1-205ENST00000483956 BPESC1Q9GZL8 116 aa8.49□□□□□ -1.05
SEC61A1-205ENST00000483956 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
SEC61A1-205ENST00000483956 SVEP1Q4LDE5 3571 aa8.49□□□□□ -1.05
SEC61A1-205ENST00000483956 A0A087WWL8 130 aa8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 FHL2Q14192 279 aa8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 F5H697 171 aa8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 IGHV1-69P01742 117 aa8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
SEC61A1-205ENST00000483956 COX7A2LO14548 114 aa8.47□□□□□ -1.05
SEC61A1-205ENST00000483956 IGHG2P01859 326 aa8.47□□□□□ -1.05
SEC61A1-205ENST00000483956 USP17L23D6RBM5 183 aa8.46□□□□□ -1.05
SEC61A1-205ENST00000483956 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.05
SEC61A1-205ENST00000483956 BEAN1Q3B7T3 259 aa8.46□□□□□ -1.06
SEC61A1-205ENST00000483956 C9orf85Q96MD7 179 aa8.46□□□□□ -1.06
SEC61A1-205ENST00000483956 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
SEC61A1-205ENST00000483956 IGHV3-11P01762 117 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms