RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 Q5VV11 94 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 Q8N6K4 173 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 CCL19Q99731 98 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 R4GMQ9 66 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 NINQ8N4C6 2090 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 PATJQ8NI35 1801 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
PTCD3-214ENST00000483925 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 PRDM2Q13029 1718 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 UQCRHLA0A096LP55 91 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 TRAV22A0A0B4J277 110 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 TRAPPC2P0DI81 140 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 TRAPPC2BP0DI82 140 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 DEFB119Q8N690 84 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 TMEM14BQ9NUH8 114 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 V9GYH0 126 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 MLH3Q9UHC1 1453 aa1.92□□□□□ -2.1
PTCD3-214ENST00000483925 KDM5AP29375 1690 aaKnown RBP1.92□□□□□ -2.1
PTCD3-214ENST00000483925 CHD1O14646 1710 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 PHIPQ8WWQ0 1821 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 A0A1W2PPM0 123 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 SYS1-DBNDD2H3BUS1 97 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 NCR3O14931 201 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 APOC3P02656 99 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 PEA15Q15121 130 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 C10orf99Q6UWK7 81 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 LINC00575Q6W349 94 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 CDC42SE2Q9NRR3 84 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 RABAC1Q9UI14 185 aa1.91□□□□□ -2.1
PTCD3-214ENST00000483925 TET3O43151 1660 aa1.9□□□□□ -2.1
PTCD3-214ENST00000483925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.9□□□□□ -2.11
PTCD3-214ENST00000483925 HMGN4O00479 90 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 CYB5AP00167 134 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 EFNA4P52798 201 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 CCL18P55774 89 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 TMEM170BQ5T4T1 132 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 VMO1Q7Z5L0 202 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 AMELXQ99217 191 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 ARFGEF3Q5TH69 2177 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 CEP162Q5TB80 1403 aa1.9□□□□□ -2.11
PTCD3-214ENST00000483925 DIP2CQ9Y2E4 1556 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 MRC1P22897 1456 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 PLIN4Q96Q06 1357 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 TNRC6AQ8NDV7 1962 aaKnown RBP1.89□□□□□ -2.11
PTCD3-214ENST00000483925 SPAG17Q6Q759 2223 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 DOCK1Q14185 1865 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 A0A087WTM6 91 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 TRBV30A0A0K0K1B3 111 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 C20orf78Q9BR46 151 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 NXT2Q9NPJ8 142 aaKnown RBP1.89□□□□□ -2.11
PTCD3-214ENST00000483925 EPRSP07814 1512 aaKnown RBP1.89□□□□□ -2.11
PTCD3-214ENST00000483925 MYH8P13535 1937 aa1.89□□□□□ -2.11
PTCD3-214ENST00000483925 MYO18AQ92614 2054 aaKnown RBP1.89□□□□□ -2.11
PTCD3-214ENST00000483925 MAGI2Q86UL8 1455 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 TMEM14DPA8MWL7 114 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 H7BZZ5 65 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 UQCRHP07919 91 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 BAGE3Q86Y29 109 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 S100A16Q96FQ6 103 aaKnown RBP1.88□□□□□ -2.11
PTCD3-214ENST00000483925 S100A13Q99584 98 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 RRBP1Q9P2E9 1410 aaKnown RBP1.88□□□□□ -2.11
PTCD3-214ENST00000483925 FANCAO15360 1455 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 TOP2BQ02880 1626 aa1.88□□□□□ -2.11
PTCD3-214ENST00000483925 BAHCC1Q9P281 2608 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 A0A0G2JND7 137 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 UNC13BO14795 1591 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 WFDC6Q9BQY6 131 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 ATP10BO94823 1461 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 ZGRF1Q86YA3 2104 aa1.87□□□□□ -2.11
PTCD3-214ENST00000483925 E9PCH4 1651 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 MYOM1P52179 1685 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 PEAK1Q9H792 1746 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 F8VRH5 84 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 H3BQF6 201 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 NMBP08949 121 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 PMCHL1Q16048 86 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 EXPH5Q8NEV8 1989 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 CHD3Q12873 2000 aaKnown RBP1.86□□□□□ -2.11
PTCD3-214ENST00000483925 EHBP1L1Q8N3D4 1523 aa1.86□□□□□ -2.11
PTCD3-214ENST00000483925 TRBV25-1A0A075B6N4 114 aa1.85□□□□□ -2.11
PTCD3-214ENST00000483925 BCE1O60756 84 aa1.85□□□□□ -2.11
PTCD3-214ENST00000483925 SAA2P0DJI9 122 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-214ENST00000483925 SMIM11AP58511 58 aa1.85□□□□□ -2.11
PTCD3-214ENST00000483925 COL4A1P02462 1669 aa1.85□□□□□ -2.11
PTCD3-214ENST00000483925 KIAA0100Q14667 2235 aaKnown RBP1.85□□□□□ -2.11
PTCD3-214ENST00000483925 IGLC7A0M8Q6 106 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 J3QKU1 62 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 M0R135 149 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 UQCR11O14957 56 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 SPINK13Q1W4C9 94 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 SFTA2Q6UW10 78 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 BAGE2Q86Y30 109 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
PTCD3-214ENST00000483925 DOCK2Q92608 1830 aa1.84□□□□□ -2.12
PTCD3-214ENST00000483925 TET1Q8NFU7 2136 aa1.84□□□□□ -2.12
PTCD3-214ENST00000483925 EDC4Q6P2E9 1401 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms