RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
COL12A1-207ENST00000483888 NPBQ8NG41 125 aa7.83□□□□□ -1.16
COL12A1-207ENST00000483888 IGKV2D-24A0A075B6R9 120 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 C3orf84H3BNL1 204 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 IGKV1-17P01599 117 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 K7EIM0 57 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 WT1P19544 449 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-207ENST00000483888 RUSC1-AS1Q66K80 236 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 MBD3L4A6NDZ8 208 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-207ENST00000483888 MBD3L3A6NE82 208 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-207ENST00000483888 MBD3L5A6NJ08 208 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-207ENST00000483888 NDUFA1O15239 70 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 NANOS2P60321 138 aaKnown RBP7.82□□□□□ -1.16
COL12A1-207ENST00000483888 LRP4O75096 1905 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 LY6HO94772 140 aa7.82□□□□□ -1.16
COL12A1-207ENST00000483888 A0A087WVE0 104 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
COL12A1-207ENST00000483888 ZNF503-AS2A6NEH8 195 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 CPAMD8Q8IZJ3 1885 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 OTOGLQ3ZCN5 2332 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 RITA1Q96K30 269 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 CRIP2P52943 208 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-207ENST00000483888 WFDC10AQ9H1F0 79 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 PYGO1Q9Y3Y4 419 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
COL12A1-207ENST00000483888 Q6ZS46 218 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 CCKP06307 115 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 RNF138Q8WVD3 245 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 GYPEP15421 78 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 Q0VFX4 171 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 POM121L12Q8N7R1 296 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 RMI2Q96E14 147 aa7.8□□□□□ -1.16
COL12A1-207ENST00000483888 IGLV3-19P01714 112 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 LINC00310P59036 64 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 ADAMTS20P59510 1910 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 CGB3P0DN86 165 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 UBE2D3P61077 147 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 UBE2D2P62837 147 aa7.79□□□□□ -1.16
COL12A1-207ENST00000483888 ZNF80P51504 273 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-207ENST00000483888 A0A0G2JNJ9 132 aa7.78□□□□□ -1.16
COL12A1-207ENST00000483888 TRBV10-1A0A0K0K1A3 114 aa7.78□□□□□ -1.16
COL12A1-207ENST00000483888 LHBP01229 141 aa7.78□□□□□ -1.16
COL12A1-207ENST00000483888 Q9UFV3 132 aa7.78□□□□□ -1.16
COL12A1-207ENST00000483888 RNF185Q96GF1 192 aa7.78□□□□□ -1.16
COL12A1-207ENST00000483888 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 E7EQL1 145 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 IGLV11-55A0A075B6I3 123 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 CGB7P0DN87 165 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 C1orf158Q8N1D5 194 aa7.77□□□□□ -1.17
COL12A1-207ENST00000483888 MYCNOSP40205 109 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 SMIM11BQ8TCY0 68 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 CTSGP08311 255 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 CELA1Q9UNI1 258 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 E7EUB6 86 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 LINC00467Q9BRT7 94 aa7.76□□□□□ -1.17
COL12A1-207ENST00000483888 TRBV7-7A0A0K0K1E9 115 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 ZNF883P0CG24 379 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 C16orf74Q96GX8 76 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 ZNF295-AS1Q8N0V1 137 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 BPESC1Q9GZL8 116 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 Q8N9L7 120 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 ESRGQ1W209 222 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 APOC4P55056 127 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 B4DSR2 109 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 VWCEQ96DN2 955 aa7.75□□□□□ -1.17
COL12A1-207ENST00000483888 ZMAT4Q9H898 229 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 APRG1Q8IVJ8 170 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 C11orf53Q8IXP5 236 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 CRYGAP11844 174 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 CRIP1P50238 77 aa7.74□□□□□ -1.17
COL12A1-207ENST00000483888 C17orf82Q86X59 251 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-207ENST00000483888 IGKV1D-37A0A075B6S9 117 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 IBA57-AS1B1ANH7 110 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 SPG11Q96JI7 2443 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 NRACQ8N912 160 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 HHLA3Q9XRX5 114 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 H3BUA1 57 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 DEFB1P60022 68 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 LY6DQ14210 128 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 DKK4Q9UBT3 224 aa7.73□□□□□ -1.17
COL12A1-207ENST00000483888 ZFAND2AQ8N6M9 145 aa7.72□□□□□ -1.17
COL12A1-207ENST00000483888 C6orf99Q4VX62 202 aa7.72□□□□□ -1.17
COL12A1-207ENST00000483888 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-207ENST00000483888 UBE2D1P51668 147 aa7.72□□□□□ -1.17
COL12A1-207ENST00000483888 RAI1Q7Z5J4 1906 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-207ENST00000483888 BEAN1Q3B7T3 259 aa7.72□□□□□ -1.17
COL12A1-207ENST00000483888 PRSS33Q8NF86 280 aa7.72□□□□□ -1.17
COL12A1-207ENST00000483888 DSCR9P59020 149 aa7.71□□□□□ -1.17
COL12A1-207ENST00000483888 P0C879 139 aa7.71□□□□□ -1.17
COL12A1-207ENST00000483888 IGLV2-23P01705 113 aa7.71□□□□□ -1.17
COL12A1-207ENST00000483888 KRTAP27-1Q3LI81 207 aa7.71□□□□□ -1.17
COL12A1-207ENST00000483888 K7ENP7 123 aa7.71□□□□□ -1.18
COL12A1-207ENST00000483888 IGHV4-30-4P0DP06 118 aa7.71□□□□□ -1.18
COL12A1-207ENST00000483888 IGHV4-31P0DP07 118 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms