RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	ESD	P10768	282 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	RAB4A	P20338	218 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	UBE2D3	P61077	147 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	UBE2D2	P62837	147 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	PDZD11	Q5EBL8	140 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	ATP6V0E2	Q8NHE4	81 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882		Q9H8V8	135 aa		10.18	□□□□□ -0.78
NR1H3-222	ENST00000483882	ABCA13	Q86UQ4	5058 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	TRBV7-3	A0A075B6L6	115 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	SMIM6	P0DI80	62 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	TIRAP	P58753	221 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	SMIM15	Q7Z3B0	74 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	BAGE3	Q86Y29	109 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	TMEM18	Q96B42	140 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	HIST1H2BL	Q99880	126 aa		10.17	□□□□□ -0.78
NR1H3-222	ENST00000483882	CDK2AP2	O75956	126 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	FABP4	P15090	132 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	LINC00310	P59036	64 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	RPL36A	P83881	106 aa	Known RBP	10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	FAM104B	Q5XKR9	115 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	SH2D6	Q7Z4S9	175 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	LINC00518	Q8N0U6	118 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	MAPKAPK5-AS1	Q8N8E1	139 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	C18orf32	Q8TCD1	76 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	RPL36AL	Q969Q0	106 aa	Known RBP	10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	RPL39L	Q96EH5	51 aa	Known RBP	10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	UPK3B	Q9BT76	320 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	GTSF1L	Q9H1H1	148 aa		10.16	□□□□□ -0.78
NR1H3-222	ENST00000483882	IGHV3-38	A0A0C4DH36	116 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	SERF1A	O75920	110 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	MRPL51	Q4U2R6	128 aa	Known RBP	10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	TTC32	Q5I0X7	151 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	SPATA12	Q7Z6I5	190 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	OR10D4P	Q8NGN7	298 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	NIT2	Q9NQR4	276 aa		10.15	□□□□□ -0.78
NR1H3-222	ENST00000483882	SMKR1	H3BMG3	65 aa		10.14	□□□□□ -0.79
NR1H3-222	ENST00000483882		H7C1H1	209 aa		10.14	□□□□□ -0.79
NR1H3-222	ENST00000483882	DNAJC30	Q96LL9	226 aa		10.14	□□□□□ -0.79
NR1H3-222	ENST00000483882	PACRG	Q96M98	296 aa	Predicted RBP	10.14	□□□□□ -0.79
NR1H3-222	ENST00000483882	KRTAP1-5	Q9BYS1	174 aa		10.14	□□□□□ -0.79
NR1H3-222	ENST00000483882	NUPR1	O60356	82 aa		10.13	□□□□□ -0.79
NR1H3-222	ENST00000483882	NCR2	O95944	276 aa		10.13	□□□□□ -0.79
NR1H3-222	ENST00000483882	IQCJ	Q1A5X6	159 aa		10.13	□□□□□ -0.79
NR1H3-222	ENST00000483882	NTM-AS1	Q6ZSK4	140 aa		10.13	□□□□□ -0.79
NR1H3-222	ENST00000483882	WFDC10B	Q8IUB3	73 aa		10.13	□□□□□ -0.79
NR1H3-222	ENST00000483882	HSPG2	P98160	4391 aa		10.12	□□□□□ -0.79
NR1H3-222	ENST00000483882	LELP1	Q5T871	98 aa		10.12	□□□□□ -0.79
NR1H3-222	ENST00000483882	NRAC	Q8N912	160 aa		10.12	□□□□□ -0.79
NR1H3-222	ENST00000483882	MRAP2	Q96G30	205 aa		10.12	□□□□□ -0.79
NR1H3-222	ENST00000483882	TNFRSF18	Q9Y5U5	241 aa		10.12	□□□□□ -0.79
NR1H3-222	ENST00000483882	TRBV6-5	A0A0K0K1A5	114 aa		10.11	□□□□□ -0.79
NR1H3-222	ENST00000483882	DEFB104A	Q8WTQ1	72 aa		10.11	□□□□□ -0.79
NR1H3-222	ENST00000483882	C12orf57	Q99622	126 aa		10.11	□□□□□ -0.79
NR1H3-222	ENST00000483882		Q8N3U1	123 aa		10.1	□□□□□ -0.79
NR1H3-222	ENST00000483882	LRP1B	Q9NZR2	4599 aa		10.1	□□□□□ -0.79
NR1H3-222	ENST00000483882	SIVA1	O15304	175 aa		10.09	□□□□□ -0.79
NR1H3-222	ENST00000483882	DAZ4	Q86SG3	579 aa	Known RBP	10.09	□□□□□ -0.79
NR1H3-222	ENST00000483882	ORMDL3	Q8N138	153 aa		10.09	□□□□□ -0.79
NR1H3-222	ENST00000483882	CHCHD1	Q96BP2	118 aa	Known RBP	10.09	□□□□□ -0.79
NR1H3-222	ENST00000483882	DAZ3	Q9NR90	486 aa	Known RBP	10.09	□□□□□ -0.79
NR1H3-222	ENST00000483882	TRBV6-8	A0A0A6YYG3	113 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882		D6R8Y8	96 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	PPBP	P02775	128 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	DNAH10OS	P0CZ25	163 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	AMT	P48728	403 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	POLR2K	P53803	58 aa	Known RBP	10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	KRTAP10-2	P60368	255 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	PYY3	Q5JQD4	70 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	RNASEK	Q6P5S7	137 aa	Known RBP	10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	PRELID3A	Q96N28	172 aa		10.08	□□□□□ -0.8
NR1H3-222	ENST00000483882	SDHAF1	A6NFY7	115 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	HSBP1	O75506	76 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	NPY	P01303	97 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	BTF3	P20290	206 aa	Known RBP	10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	JOSD1	Q15040	202 aa	Predicted RBP	10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882		Q8N1X5	172 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	URB1-AS1	Q96HZ7	61 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	TMEM70	Q9BUB7	260 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	LAMTOR2	Q9Y2Q5	125 aa		10.07	□□□□□ -0.8
NR1H3-222	ENST00000483882	TRAV8-6	A0A0B4J262	113 aa		10.06	□□□□□ -0.8
NR1H3-222	ENST00000483882	PMCH	P20382	165 aa		10.06	□□□□□ -0.8
NR1H3-222	ENST00000483882	CKS2	P33552	79 aa		10.06	□□□□□ -0.8
NR1H3-222	ENST00000483882	NIT1	Q86X76	327 aa		10.06	□□□□□ -0.8
NR1H3-222	ENST00000483882	ST20	Q9HBF5	79 aa		10.06	□□□□□ -0.8
NR1H3-222	ENST00000483882	TNFRSF6B	O95407	300 aa		10.05	□□□□□ -0.8
NR1H3-222	ENST00000483882	TRBV27	A0A0K0K1C4	114 aa		10.04	□□□□□ -0.8
NR1H3-222	ENST00000483882	TSHB	P01222	138 aa		10.04	□□□□□ -0.8
NR1H3-222	ENST00000483882	SUMO2	P61956	95 aa	Known RBP	10.04	□□□□□ -0.8
NR1H3-222	ENST00000483882	LINC01556	Q5JQF7	62 aa		10.04	□□□□□ -0.8
NR1H3-222	ENST00000483882		I3L3M4	83 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	IGHV3-30	P01768	117 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	IGHV3-33	P01772	117 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	LINC00614	P0C842	121 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	IGHV3-30-3	P0DP02	117 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	IGHV3-30-5	P0DP03	117 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	COTL1	Q14019	142 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	TMEM97	Q5BJF2	176 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	FA2H	Q7L5A8	372 aa		10.03	□□□□□ -0.8
NR1H3-222	ENST00000483882	C20orf78	Q9BR46	151 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms