RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 BCL2P10415 239 aa11.49□□□□□ -0.57
ATG4B-221ENST00000483778 CLRN3Q8NCR9 226 aa11.49□□□□□ -0.57
ATG4B-221ENST00000483778 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
ATG4B-221ENST00000483778 SMIM12Q96EX1 92 aa11.49□□□□□ -0.57
ATG4B-221ENST00000483778 RNASE7Q9H1E1 156 aaKnown RBP11.49□□□□□ -0.57
ATG4B-221ENST00000483778 TRGC1P0CF51 173 aa11.48□□□□□ -0.57
ATG4B-221ENST00000483778 CTRLP40313 264 aa11.48□□□□□ -0.57
ATG4B-221ENST00000483778 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
ATG4B-221ENST00000483778 PGLYRP4Q96LB8 373 aa11.48□□□□□ -0.57
ATG4B-221ENST00000483778 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
ATG4B-221ENST00000483778 XKRY2A2RUG3 117 aa11.47□□□□□ -0.57
ATG4B-221ENST00000483778 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
ATG4B-221ENST00000483778 TWIST1Q15672 202 aa11.47□□□□□ -0.57
ATG4B-221ENST00000483778 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
ATG4B-221ENST00000483778 TEX46H3BTG2 121 aa11.46□□□□□ -0.57
ATG4B-221ENST00000483778 AMTP48728 403 aa11.46□□□□□ -0.57
ATG4B-221ENST00000483778 SERTAD4-AS1Q5TG53 156 aa11.46□□□□□ -0.57
ATG4B-221ENST00000483778 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
ATG4B-221ENST00000483778 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
ATG4B-221ENST00000483778 RPL39LQ96EH5 51 aaKnown RBP11.46□□□□□ -0.57
ATG4B-221ENST00000483778 COTL1Q14019 142 aa11.45□□□□□ -0.58
ATG4B-221ENST00000483778 Q6ZNX1 250 aa11.45□□□□□ -0.58
ATG4B-221ENST00000483778 C15orf56Q8N910 161 aa11.45□□□□□ -0.58
ATG4B-221ENST00000483778 CNFNQ9BYD5 112 aa11.45□□□□□ -0.58
ATG4B-221ENST00000483778 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
ATG4B-221ENST00000483778 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
ATG4B-221ENST00000483778 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
ATG4B-221ENST00000483778 TCTE3Q8IZS6 198 aa11.44□□□□□ -0.58
ATG4B-221ENST00000483778 RPP21Q9H633 154 aaKnown RBP11.44□□□□□ -0.58
ATG4B-221ENST00000483778 A0A087WYN8 130 aa11.43□□□□□ -0.58
ATG4B-221ENST00000483778 SLC51BQ86UW2 128 aa11.43□□□□□ -0.58
ATG4B-221ENST00000483778 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
ATG4B-221ENST00000483778 HMCN2Q8NDA2 5059 aa11.42□□□□□ -0.58
ATG4B-221ENST00000483778 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
ATG4B-221ENST00000483778 UBE2L6O14933 153 aa11.42□□□□□ -0.58
ATG4B-221ENST00000483778 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
ATG4B-221ENST00000483778 DPH3Q96FX2 82 aa11.42□□□□□ -0.58
ATG4B-221ENST00000483778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-221ENST00000483778 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-221ENST00000483778 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
ATG4B-221ENST00000483778 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
ATG4B-221ENST00000483778 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
ATG4B-221ENST00000483778 AP5S1Q9NUS5 200 aa11.4□□□□□ -0.58
ATG4B-221ENST00000483778 COX6A2Q02221 97 aa11.39□□□□□ -0.59
ATG4B-221ENST00000483778 PRSS3P2Q8NHM4 247 aa11.39□□□□□ -0.59
ATG4B-221ENST00000483778 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-221ENST00000483778 PLA2G2DQ9UNK4 145 aa11.38□□□□□ -0.59
ATG4B-221ENST00000483778 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-221ENST00000483778 GATCO43716 136 aaKnown RBP11.37□□□□□ -0.59
ATG4B-221ENST00000483778 FGF6P10767 208 aa11.37□□□□□ -0.59
ATG4B-221ENST00000483778 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
ATG4B-221ENST00000483778 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
ATG4B-221ENST00000483778 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
ATG4B-221ENST00000483778 TAGLN2P37802 199 aaKnown RBP11.36□□□□□ -0.59
ATG4B-221ENST00000483778 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
ATG4B-221ENST00000483778 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
ATG4B-221ENST00000483778 RNF185Q96GF1 192 aa11.36□□□□□ -0.59
ATG4B-221ENST00000483778 PHOX2AO14813 284 aa11.35□□□□□ -0.59
ATG4B-221ENST00000483778 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
ATG4B-221ENST00000483778 FOXI1Q12951 378 aa11.35□□□□□ -0.59
ATG4B-221ENST00000483778 LINC00526Q96FQ7 95 aa11.35□□□□□ -0.59
ATG4B-221ENST00000483778 UBR4Q5T4S7 5183 aa11.34□□□□□ -0.59
ATG4B-221ENST00000483778 NCR2O95944 276 aa11.34□□□□□ -0.59
ATG4B-221ENST00000483778 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
ATG4B-221ENST00000483778 Q6ZRU5 148 aa11.34□□□□□ -0.59
ATG4B-221ENST00000483778 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 TSHBP01222 138 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 APCSP02743 223 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 PMCHP20382 165 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 CEBPGP53567 150 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 LYPD6BQ8NI32 183 aa11.33□□□□□ -0.6
ATG4B-221ENST00000483778 A8MWL6 223 aa11.32□□□□□ -0.6
ATG4B-221ENST00000483778 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
ATG4B-221ENST00000483778 ESDP10768 282 aa11.32□□□□□ -0.6
ATG4B-221ENST00000483778 MAJINQ3KP22 176 aa11.32□□□□□ -0.6
ATG4B-221ENST00000483778 SMIM15Q7Z3B0 74 aa11.32□□□□□ -0.6
ATG4B-221ENST00000483778 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
ATG4B-221ENST00000483778 TRBV6-5A0A0K0K1A5 114 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 H7C423 109 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 I3L3M4 83 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 XCL1P47992 114 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 OR5A1Q8NGJ0 315 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 TMEM242Q9NWH2 141 aa11.31□□□□□ -0.6
ATG4B-221ENST00000483778 A0A096LNI7 61 aa11.3□□□□□ -0.6
ATG4B-221ENST00000483778 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
ATG4B-221ENST00000483778 BLOC1S1P78537 153 aa11.3□□□□□ -0.6
ATG4B-221ENST00000483778 ODF1Q14990 250 aa11.3□□□□□ -0.6
ATG4B-221ENST00000483778 TEX261Q6UWH6 196 aa11.3□□□□□ -0.6
ATG4B-221ENST00000483778 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
ATG4B-221ENST00000483778 CCL25O15444 150 aa11.29□□□□□ -0.6
ATG4B-221ENST00000483778 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
ATG4B-221ENST00000483778 STPG4Q8N801 248 aa11.29□□□□□ -0.6
ATG4B-221ENST00000483778 RAB4AP20338 218 aa11.28□□□□□ -0.6
ATG4B-221ENST00000483778 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
ATG4B-221ENST00000483778 ST20Q9HBF5 79 aa11.28□□□□□ -0.6
ATG4B-221ENST00000483778 HIGD1CA8MV81 97 aa11.27□□□□□ -0.61
ATG4B-221ENST00000483778 SMKR1H3BMG3 65 aa11.27□□□□□ -0.61
ATG4B-221ENST00000483778 CT83Q5H943 113 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms