RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 M0QY20 66 aa12.35□□□□□ -0.43
MRPL28-210ENST00000483764 NPSP0C0P6 89 aa12.35□□□□□ -0.43
MRPL28-210ENST00000483764 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
MRPL28-210ENST00000483764 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
MRPL28-210ENST00000483764 RHODO00212 210 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 HERVK_113P61574 105 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 VAMP3Q15836 100 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 ZNF56Q15929 161 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
MRPL28-210ENST00000483764 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
MRPL28-210ENST00000483764 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 M0R2P5 195 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 PMVKQ15126 192 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 RNF183Q96D59 192 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 C16orf74Q96GX8 76 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 X6R8D5 127 aa12.33□□□□□ -0.44
MRPL28-210ENST00000483764 A0A087WWL8 130 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 IGIPA6NJ69 53 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 CRYBA4P53673 196 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 E9PLD3 99 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 I3L3M4 83 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 CHAC1Q9BUX1 264 aa12.32□□□□□ -0.44
MRPL28-210ENST00000483764 TRBV25-1A0A075B6N4 114 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 C9orf118A6NHY6 69 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 PRSS29PA6NIE9 313 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 TM2D2Q9BX73 214 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 TP73-AS1Q9UF72 201 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
MRPL28-210ENST00000483764 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 GTF2H5Q6ZYL4 71 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 IL17DQ8TAD2 202 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 DNAJC30Q96LL9 226 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 NBEAL2Q6ZNJ1 2754 aa12.3□□□□□ -0.44
MRPL28-210ENST00000483764 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
MRPL28-210ENST00000483764 JPT2Q9H910 190 aa12.29□□□□□ -0.44
MRPL28-210ENST00000483764 SMIM13P0DJ93 91 aa12.28□□□□□ -0.44
MRPL28-210ENST00000483764 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
MRPL28-210ENST00000483764 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
MRPL28-210ENST00000483764 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.44
MRPL28-210ENST00000483764 OVOL2Q9BRP0 275 aa12.27□□□□□ -0.44
MRPL28-210ENST00000483764 CST9LQ9H4G1 147 aa12.27□□□□□ -0.44
MRPL28-210ENST00000483764 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.44
MRPL28-210ENST00000483764 C11orf86A6NJI1 115 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 CCL25O15444 150 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 MIFP14174 115 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 EMP1P54849 157 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 CEND1Q8N111 149 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
MRPL28-210ENST00000483764 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
MRPL28-210ENST00000483764 C20orf203Q8NBC4 194 aa12.26□□□□□ -0.45
MRPL28-210ENST00000483764 TRGV1A0A0A0MS02 117 aa12.25□□□□□ -0.45
MRPL28-210ENST00000483764 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
MRPL28-210ENST00000483764 K7EP13 123 aa12.25□□□□□ -0.45
MRPL28-210ENST00000483764 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
MRPL28-210ENST00000483764 RETNQ9HD89 108 aa12.25□□□□□ -0.45
MRPL28-210ENST00000483764 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 TSHBP01222 138 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 UFSP1Q6NVU6 142 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 Q6ZTI0 123 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 Q8NAQ8 132 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 TNFRSF18Q9Y5U5 241 aa12.24□□□□□ -0.45
MRPL28-210ENST00000483764 GCSHP23434 173 aa12.23□□□□□ -0.45
MRPL28-210ENST00000483764 OR5A1Q8NGJ0 315 aa12.23□□□□□ -0.45
MRPL28-210ENST00000483764 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
MRPL28-210ENST00000483764 TMEM238LA0A1B0GVL6 79 aa12.22□□□□□ -0.45
MRPL28-210ENST00000483764 A6NJY4 79 aa12.22□□□□□ -0.45
MRPL28-210ENST00000483764 CIDEAO60543 219 aa12.22□□□□□ -0.45
MRPL28-210ENST00000483764 AMMECR1LQ6DCA0 310 aa12.22□□□□□ -0.45
MRPL28-210ENST00000483764 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
MRPL28-210ENST00000483764 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 DEFB4AO15263 64 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 RS1O15537 224 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
MRPL28-210ENST00000483764 GAGE12BA1L429 117 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 GAGE7O76087 117 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 GAGE12FP0CL80 117 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 GAGE12GP0CL81 117 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 GAGE12IP0CL82 117 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 HIST1H4GQ99525 98 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 TM2D3Q9BRN9 247 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.46
MRPL28-210ENST00000483764 FABP2P12104 132 aa12.2□□□□□ -0.46
MRPL28-210ENST00000483764 TCTAP57738 103 aa12.2□□□□□ -0.46
MRPL28-210ENST00000483764 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
MRPL28-210ENST00000483764 Q6ZVH6 145 aa12.2□□□□□ -0.46
MRPL28-210ENST00000483764 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
MRPL28-210ENST00000483764 TRGV2A0A075B6R0 118 aa12.19□□□□□ -0.46
MRPL28-210ENST00000483764 LYRM9A8MSI8 78 aa12.19□□□□□ -0.46
MRPL28-210ENST00000483764 K7EP34 96 aa12.19□□□□□ -0.46
MRPL28-210ENST00000483764 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
MRPL28-210ENST00000483764 VCX2Q9H322 139 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms