RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 SPINK8P0C7L1 97 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 ID1P41134 155 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 ZFAND2AQ8N6M9 145 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 RASL10AQ92737 203 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 RBMY1BA6NDE4 496 aaKnown RBP7.05□□□□□ -1.28
LIMK1-205ENST00000483414 RBMY1EA6NEQ0 496 aaKnown RBP7.05□□□□□ -1.28
LIMK1-205ENST00000483414 F8VRH5 84 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 RBMY1DP0C7P1 496 aaKnown RBP7.05□□□□□ -1.28
LIMK1-205ENST00000483414 GAGE13Q4V321 117 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 ZFP2Q6ZN57 461 aa7.05□□□□□ -1.28
LIMK1-205ENST00000483414 PHLDA1Q8WV24 401 aaPredicted RBP7.05□□□□□ -1.28
LIMK1-205ENST00000483414 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 DUSP14O95147 198 aaKnown RBP7.04□□□□□ -1.28
LIMK1-205ENST00000483414 PLNP26678 52 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 PSMB2P49721 201 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 MRAP2Q96G30 205 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 GIG44P09565 113 aaPredicted RBP7.04□□□□□ -1.28
LIMK1-205ENST00000483414 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
LIMK1-205ENST00000483414 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 APRG1Q8IVJ8 170 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
LIMK1-205ENST00000483414 A8MZ25 164 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 H7C2G1 150 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 XGP55808 180 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 SPINK13Q1W4C9 94 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 TP53TG1Q9Y2A0 90 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 IGLV2-18A0A075B6J9 118 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 HLA-DRB4P13762 266 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 FOXI2Q6ZQN5 318 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 MRPL16Q9NX20 251 aaKnown RBP7.03□□□□□ -1.28
LIMK1-205ENST00000483414 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 A0A0J9YX75 114 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 B5MCH6 92 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
LIMK1-205ENST00000483414 NOTCH1P46531 2555 aa7.02□□□□□ -1.29
LIMK1-205ENST00000483414 SCGB1C2P0DMR2 95 aa7.02□□□□□ -1.29
LIMK1-205ENST00000483414 MGAM2Q2M2H8 2515 aa7.02□□□□□ -1.29
LIMK1-205ENST00000483414 MYMXA0A1B0GTQ4 84 aa7.02□□□□□ -1.29
LIMK1-205ENST00000483414 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
LIMK1-205ENST00000483414 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
LIMK1-205ENST00000483414 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
LIMK1-205ENST00000483414 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
LIMK1-205ENST00000483414 MDFICQ9P1T7 246 aa7.01□□□□□ -1.29
LIMK1-205ENST00000483414 H3BMM0 161 aa7.01□□□□□ -1.29
LIMK1-205ENST00000483414 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
LIMK1-205ENST00000483414 SNRPD3P62318 126 aaKnown RBP7.01□□□□□ -1.29
LIMK1-205ENST00000483414 ZMAT4Q9H898 229 aa7.01□□□□□ -1.29
LIMK1-205ENST00000483414 LINC01549A6NIU2 74 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 E9PLD3 99 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 RNASE3P12724 160 aaKnown RBP7□□□□□ -1.29
LIMK1-205ENST00000483414 HERVK_113P61574 105 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 KNCNA6PVL3 124 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 ODF3Q96PU9 254 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 CDIP1Q9H305 208 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 J3QR89 54 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 DEFB131AP59861 70 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 TOMM6Q96B49 74 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 HIGD1BQ9P298 99 aa7□□□□□ -1.29
LIMK1-205ENST00000483414 PRM2P04554 102 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 SUMO4Q6EEV6 95 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 KLLNB2CW77 178 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 VCYO14598 125 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 RBMY1A1P0DJD3 496 aaKnown RBP6.99□□□□□ -1.29
LIMK1-205ENST00000483414 RBMY1CP0DJD4 496 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 RBMY1FQ15415 496 aaKnown RBP6.99□□□□□ -1.29
LIMK1-205ENST00000483414 ZNF876PQ49A33 203 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 TRBV7-9A0A0J9YWB2 115 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 K7EIL1 84 aa6.99□□□□□ -1.29
LIMK1-205ENST00000483414 LYSTQ99698 3801 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 C11orf86A6NJI1 115 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 PPP1R17O96001 155 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 PRSS2P07478 247 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 NEXN-AS1Q8NBZ9 246 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 MUC4Q99102 2169 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 TENM3Q9P273 2699 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 F8W1H4 67 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
LIMK1-205ENST00000483414 FOXI1Q12951 378 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 RRN3P1Q2M238 152 aa6.98□□□□□ -1.29
LIMK1-205ENST00000483414 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
LIMK1-205ENST00000483414 Q1RN00 199 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
LIMK1-205ENST00000483414 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
LIMK1-205ENST00000483414 Q6ZUT4 128 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms