RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 HNRNPA3P51991 378 aaKnown RBP4.8□□□□□ -1.64
CSDE1-206ENST00000483030 LGALSLQ3ZCW2 172 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-206ENST00000483030 EIF5AL1Q6IS14 154 aaKnown RBP4.8□□□□□ -1.64
CSDE1-206ENST00000483030 ZFP2Q6ZN57 461 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 SCGB1C1Q8TD33 95 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 UBE2WQ96B02 151 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 NDFIP1Q9BT67 221 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 PARLQ9H300 379 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 PRO1933Q9H354 126 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
CSDE1-206ENST00000483030 COLCA2A8K830 154 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 A8MWV9 139 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
CSDE1-206ENST00000483030 SEC11BP0C7V7 166 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 JOSD1Q15040 202 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-206ENST00000483030 C10orf91Q5T1B1 145 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 PQLC2Q6ZP29 291 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 C14orf178Q8N769 122 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-206ENST00000483030 HIST1H2BAQ96A08 127 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 LINC00479Q96M42 142 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 SIGMAR1Q99720 223 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 SMIM3Q9BZL3 60 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 JPT2Q9H910 190 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 SMCO4Q9NRQ5 59 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
CSDE1-206ENST00000483030 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
CSDE1-206ENST00000483030 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 A0A087WX48 190 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 TCRAP04437 139 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
CSDE1-206ENST00000483030 CYCSP99999 105 aaKnown RBP4.78□□□□□ -1.64
CSDE1-206ENST00000483030 PRNTQ86SH4 94 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 V9GYY9 64 aa4.78□□□□□ -1.64
CSDE1-206ENST00000483030 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 HSBP1O75506 76 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 GIPP09681 153 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-206ENST00000483030 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 ELOBQ15370 118 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 RHEBQ15382 184 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 UFSP1Q6NVU6 142 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 ZNF664Q8N3J9 261 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 C5orf17Q8NAS9 161 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 OR10G9Q8NGN4 311 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 OR10G7Q8NGN6 311 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 PPP1R1CQ8WVI7 109 aa4.77□□□□□ -1.65
CSDE1-206ENST00000483030 TMEM262E9PQX1 116 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 ARL14EPLP0DKL9 152 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 RPL12P30050 165 aaKnown RBP4.76□□□□□ -1.65
CSDE1-206ENST00000483030 ASIPP42127 132 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 H2BFSP57053 126 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 Q0VG73 95 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 FAM74A4Q5TZK3 123 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 ENHOQ6UWT2 76 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 OR2G3Q8NGZ4 309 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 CHCHD7Q9BUK0 85 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 EPDR1Q9UM22 224 aa4.76□□□□□ -1.65
CSDE1-206ENST00000483030 FABP5P3A8MUU1 101 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 H3BVH4 76 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 RHODO00212 210 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 PHOX2AO14813 284 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 MPC2O95563 127 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 PRSS1P07477 247 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 GCHFRP30047 84 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 TMUB2Q71RG4 321 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 FA2HQ7L5A8 372 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 OR10D4PQ8NGN7 298 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 MARVELD1Q9BSK0 173 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 SPANXB1Q9NS25 103 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-206ENST00000483030 SPANXCQ9NY87 97 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 IL36BQ9NZH7 164 aa4.75□□□□□ -1.65
CSDE1-206ENST00000483030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-206ENST00000483030 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 B4DEV8 164 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 PANO1I0J062 215 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 HLA-DQA1P01909 254 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 ARMS2P0C7Q2 107 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 RPL36AP83881 106 aaKnown RBP4.74□□□□□ -1.65
CSDE1-206ENST00000483030 Q6ZRU5 148 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 C9orf163Q8N9P6 203 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 OR11H4Q8NGC9 324 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 OR13C6PQ8NH95 151 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 RPL36ALQ969Q0 106 aaKnown RBP4.74□□□□□ -1.65
CSDE1-206ENST00000483030 NAT8Q9UHE5 227 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 HSPB8Q9UJY1 196 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 ARL2-SNX15V9GYD0 113 aa4.74□□□□□ -1.65
CSDE1-206ENST00000483030 TRBV7-3A0A075B6L6 115 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 TRBV10-1A0A0K0K1A3 114 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 INMT-MINDY4F8WBC2 141 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 CRPP02741 224 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
CSDE1-206ENST00000483030 ESDP10768 282 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 UBE2D3P61077 147 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 UBE2D2P62837 147 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 TMEM97Q5BJF2 176 aa4.73□□□□□ -1.65
CSDE1-206ENST00000483030 SDIM1Q6ZPB5 146 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms