RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 FRZBQ92765 325 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 SCRT2Q9NQ03 307 aa8.61□□□□□ -1.03
COL21A1-209ENST00000482933 A0A1B0GW15 77 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 C19orf71A6NCJ1 209 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 ARMS2P0C7Q2 107 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
COL21A1-209ENST00000482933 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
COL21A1-209ENST00000482933 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
COL21A1-209ENST00000482933 GRIFINA4D1Z8 144 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 GAGE1Q13065 139 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 GAGE4Q13068 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 GAGE5Q13069 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 Q6ZSN1 163 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
COL21A1-209ENST00000482933 RPP21Q9H633 154 aaKnown RBP8.59□□□□□ -1.03
COL21A1-209ENST00000482933 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL21A1-209ENST00000482933 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
COL21A1-209ENST00000482933 LAGE3Q14657 143 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 TMEM18Q96B42 140 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 JPT2Q9H910 190 aa8.58□□□□□ -1.04
COL21A1-209ENST00000482933 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
COL21A1-209ENST00000482933 PRR27Q6MZM9 219 aa8.57□□□□□ -1.04
COL21A1-209ENST00000482933 Q9HAA7 133 aa8.57□□□□□ -1.04
COL21A1-209ENST00000482933 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
COL21A1-209ENST00000482933 M0R381 172 aa8.56□□□□□ -1.04
COL21A1-209ENST00000482933 GCSHP23434 173 aa8.56□□□□□ -1.04
COL21A1-209ENST00000482933 S100A12P80511 92 aa8.56□□□□□ -1.04
COL21A1-209ENST00000482933 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
COL21A1-209ENST00000482933 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
COL21A1-209ENST00000482933 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
COL21A1-209ENST00000482933 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
COL21A1-209ENST00000482933 LRCOL1A6NCL2 159 aa8.55□□□□□ -1.04
COL21A1-209ENST00000482933 PHOX2AO14813 284 aa8.55□□□□□ -1.04
COL21A1-209ENST00000482933 FOXA3P55318 350 aaPredicted RBP8.55□□□□□ -1.04
COL21A1-209ENST00000482933 C12orf57Q99622 126 aa8.55□□□□□ -1.04
COL21A1-209ENST00000482933 A0A087WWL8 130 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 TRAV8-3A0A0A6YYJ7 113 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 XGP55808 180 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 RAB4BP61018 213 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 RIGQ13278 110 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 Q8N814 137 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-209ENST00000482933 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 APCSP02743 223 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 HBBP68871 147 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 RPL36AP83881 106 aaKnown RBP8.54□□□□□ -1.04
COL21A1-209ENST00000482933 Q0VG73 95 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 HIST3H2BBQ8N257 126 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 RPL36ALQ969Q0 106 aaKnown RBP8.54□□□□□ -1.04
COL21A1-209ENST00000482933 Q9UF83 564 aa8.54□□□□□ -1.04
COL21A1-209ENST00000482933 FAT1Q14517 4588 aa8.53□□□□□ -1.04
COL21A1-209ENST00000482933 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
COL21A1-209ENST00000482933 OR2D3Q8NGH3 330 aa8.53□□□□□ -1.04
COL21A1-209ENST00000482933 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
COL21A1-209ENST00000482933 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
COL21A1-209ENST00000482933 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
COL21A1-209ENST00000482933 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 SNAI2O43623 268 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 RAB4AP20338 218 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 NIT1Q86X76 327 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 RMI2Q96E14 147 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 DNAH8Q96JB1 4490 aa8.51□□□□□ -1.05
COL21A1-209ENST00000482933 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 OR5AL1P0C617 328 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 ESDP10768 282 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 FABP4P15090 132 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 UBE2D3P61077 147 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 UBE2D2P62837 147 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 ZNF56Q15929 161 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 SPANXN1Q5VSR9 72 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
COL21A1-209ENST00000482933 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 OR10AG1Q8NH19 301 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 TMEM70Q9BUB7 260 aa8.5□□□□□ -1.05
COL21A1-209ENST00000482933 A0A087WX48 190 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 A0A1B0GXF2 115 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 F2Z2F3 143 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 OR10D4PQ8NGN7 298 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 GTSF1Q8WW33 167 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
COL21A1-209ENST00000482933 IQCJQ1A5X6 159 aa8.48□□□□□ -1.05
COL21A1-209ENST00000482933 Q5VSD8 79 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms