RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 SPAG11AQ6PDA7 123 aa1.39□□□□□ -2.19
CLCC1-209ENST00000482889 S100A16Q96FQ6 103 aaKnown RBP1.39□□□□□ -2.19
CLCC1-209ENST00000482889 NXT2Q9NPJ8 142 aaKnown RBP1.39□□□□□ -2.19
CLCC1-209ENST00000482889 PRO1854Q9UHT4 67 aa1.39□□□□□ -2.19
CLCC1-209ENST00000482889 ABCA3Q99758 1704 aa1.39□□□□□ -2.19
CLCC1-209ENST00000482889 PHRF1Q9P1Y6 1649 aaKnown RBP1.38□□□□□ -2.19
CLCC1-209ENST00000482889 DOCK1Q14185 1865 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
CLCC1-209ENST00000482889 A0A087WTM6 91 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 SYS1-DBNDD2H3BUS1 97 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 HMGN4O00479 90 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 UBE2D3P61077 147 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 UBE2D2P62837 147 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 FAM74A4Q5TZK3 123 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 DEFB132Q7Z7B7 95 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 TET1Q8NFU7 2136 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 CCL19Q99731 98 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 DYNLRB1Q9NP97 96 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 UQCR10Q9UDW1 63 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 CACFD1Q9UGQ2 172 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 V9GYV3 84 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 PRDM15P57071 1507 aaPredicted RBP1.38□□□□□ -2.19
CLCC1-209ENST00000482889 CHD3Q12873 2000 aaKnown RBP1.38□□□□□ -2.19
CLCC1-209ENST00000482889 RREB1Q92766 1687 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 MYO18AQ92614 2054 aaKnown RBP1.38□□□□□ -2.19
CLCC1-209ENST00000482889 LAMC3Q9Y6N6 1575 aa1.38□□□□□ -2.19
CLCC1-209ENST00000482889 KDM5AP29375 1690 aaKnown RBP1.37□□□□□ -2.19
CLCC1-209ENST00000482889 TOPAZ1Q8N9V7 1692 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 UQCRHLA0A096LP55 91 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 C10orf142B7Z368 130 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 ALKAL2Q6UX46 152 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 FAM167A-AS1Q96KT0 104 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 TRGV9Q99603 122 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 HIGD1BQ9P298 99 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 V9GYH0 126 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 PRRC2BQ5JSZ5 2229 aaKnown RBP1.37□□□□□ -2.19
CLCC1-209ENST00000482889 ADGRB2O60241 1585 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 NWD2Q9ULI1 1742 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 SHROOM2Q13796 1616 aa1.37□□□□□ -2.19
CLCC1-209ENST00000482889 PATJQ8NI35 1801 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 CASP8AP2Q9UKL3 1982 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 ESPL1Q14674 2120 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 NDUFC1O43677 76 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 ERCC6L2Q5T890 1561 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 Q6ZQY7 126 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 FAM223AQ8IWN6 122 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 CDC42SE2Q9NRR3 84 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 LENEPQ9Y5L5 61 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 ARL2-SNX15V9GYD0 113 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 MYH8P13535 1937 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 MRC1P22897 1456 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 ZGRF1Q86YA3 2104 aa1.36□□□□□ -2.19
CLCC1-209ENST00000482889 NRXN2Q9P2S2 1712 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 MARF1Q9Y4F3 1742 aaKnown RBP1.35□□□□□ -2.19
CLCC1-209ENST00000482889 BLMP54132 1417 aaPredicted RBP1.35□□□□□ -2.19
CLCC1-209ENST00000482889 DLEC1Q9Y238 1755 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 H7BZZ5 65 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 COX6CP09669 75 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 EFNA4P52798 201 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 CAV3P56539 151 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 TMEM170BQ5T4T1 132 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 ZNF720Q7Z2F6 126 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 R4GMQ9 66 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 MLH3Q9UHC1 1453 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 MON2Q7Z3U7 1717 aa1.35□□□□□ -2.19
CLCC1-209ENST00000482889 EDC4Q6P2E9 1401 aaKnown RBP1.34□□□□□ -2.19
CLCC1-209ENST00000482889 UACAQ9BZF9 1416 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 TRGV1A0A0A0MS02 117 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 CTXND1A0A1B0GTU2 59 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 IGLC7A0M8Q6 106 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 M0R135 149 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 M0R3E3 92 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 CCL18P55774 89 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 KLKP1Q107X0 134 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 PPP1R1CQ8WVI7 109 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 Q96NJ1 140 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 S100A13Q99584 98 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 TET3O43151 1660 aa1.34□□□□□ -2.19
CLCC1-209ENST00000482889 ZNF142P52746 1687 aaPredicted RBP1.34□□□□□ -2.19
CLCC1-209ENST00000482889 ABCA4P78363 2273 aa1.34□□□□□ -2.2
CLCC1-209ENST00000482889 KDM5DQ9BY66 1539 aa1.34□□□□□ -2.2
CLCC1-209ENST00000482889 KDM6BO15054 1643 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 CHD1O14646 1710 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 TRBV30A0A0K0K1B3 111 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 TMEM14DPA8MWL7 114 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 F8VRH5 84 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 NCR3O14931 201 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 UQCRHP07919 91 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 ETDBQ3ZM63 59 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 TMEM14BQ9NUH8 114 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 SPCS1Q9Y6A9 102 aa1.33□□□□□ -2.2
CLCC1-209ENST00000482889 E9PCH4 1651 aa1.32□□□□□ -2.2
CLCC1-209ENST00000482889 EPRSP07814 1512 aaKnown RBP1.32□□□□□ -2.2
CLCC1-209ENST00000482889 TRAV1-2A0A0B4J238 106 aa1.32□□□□□ -2.2
CLCC1-209ENST00000482889 FAM223BA6NKX1 122 aa1.32□□□□□ -2.2
CLCC1-209ENST00000482889 J3QKU1 62 aa1.32□□□□□ -2.2
CLCC1-209ENST00000482889 PRB1P04280 392 aa1.32□□□□□ -2.2
CLCC1-209ENST00000482889 ACYP2P14621 99 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms