RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 BAALC-AS2P0C853 105 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 NDPQ00604 133 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 LINC00643Q86TS7 51 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 TMEM254Q8TBM7 123 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 IFI27L1Q96BM0 104 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 LINC00167Q96N53 147 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 PROK2Q9HC23 129 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 MROH2AA6NES4 1674 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 SIP14410 1827 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 MYO7BQ6PIF6 2116 aa2.47□□□□□ -2.01
VPS41-212ENST00000482217 PRRC2AP48634 2157 aaKnown RBP2.46□□□□□ -2.02
VPS41-212ENST00000482217 TRBV7-3A0A075B6L6 115 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 TRAV12-3A0A0B4J271 114 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 A0A1W2PNM2 257 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 FAM223BA6NKX1 122 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 SPANXN5Q5MJ07 72 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.46□□□□□ -2.02
VPS41-212ENST00000482217 FAM167A-AS1Q96KT0 104 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 HILPDAQ9Y5L2 63 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 CROCC2H7BZ55 1655 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 ADCY10Q96PN6 1610 aa2.46□□□□□ -2.02
VPS41-212ENST00000482217 CRYBG1Q9Y4K1 1723 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 CDC42BPBQ9Y5S2 1711 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 DIP2AQ14689 1571 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 MYOM1P52179 1685 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 TMSB15BA0A087X1C1 80 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 IQCF6A8MYZ5 107 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 C10orf128Q5T292 105 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 ZNF833PQ6ZTB9 187 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 TIMM21Q9BVV7 248 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 LHFPL6Q9Y693 200 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 COL16A1Q07092 1604 aaPredicted RBP2.45□□□□□ -2.02
VPS41-212ENST00000482217 MYO7AQ13402 2215 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 SHROOM3Q8TF72 1996 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 TSC2P49815 1807 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 ZNF236Q9UL36 1845 aa2.45□□□□□ -2.02
VPS41-212ENST00000482217 ANKRD36A6QL64 1941 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 CEP192Q8TEP8 1941 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 SCN7AQ01118 1682 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 TET1Q8NFU7 2136 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 TRAV12-1A0A0B4J245 112 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 CLPSL1A2RUU4 121 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 C2orf70A6NJV1 201 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 F8WEM9 126 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 CHKB-CPT1BH3BT56 60 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 ACYP1P07311 99 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 C20orf197Q8N268 126 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 NUP188Q5SRE5 1749 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 ARHGEF5Q12774 1597 aa2.44□□□□□ -2.02
VPS41-212ENST00000482217 UBR3Q6ZT12 1888 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 MED12Q93074 2177 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 RTL8CO15255 209 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 BCE1O60756 84 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 C3orf79P0CE67 100 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 COX8AP10176 69 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 PI4KAP42356 2102 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 UBE2D1P51668 147 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 EDDM3BP56851 147 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 DEFB121Q5J5C9 76 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 XAF1Q6GPH4 301 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 ANAPC11Q9NYG5 84 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 PSENENQ9NZ42 101 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 C22orf24Q9Y442 160 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 UNC13CQ8NB66 2214 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 IQSEC2Q5JU85 1478 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 COL4A5P29400 1685 aa2.43□□□□□ -2.02
VPS41-212ENST00000482217 CDC42BPAQ5VT25 1732 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 IFT172Q9UG01 1749 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 TRBV25-1A0A075B6N4 114 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 TMEM30CPA0ZSE6 113 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
VPS41-212ENST00000482217 ZNF818PQ6ZRF7 136 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 CYYR1Q96J86 154 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 LIMD2Q9BT23 127 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 R4GN34 69 aa2.42□□□□□ -2.02
VPS41-212ENST00000482217 TNRC6BQ9UPQ9 1833 aaKnown RBP2.42□□□□□ -2.02
VPS41-212ENST00000482217 PLCH1Q4KWH8 1693 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 SAMD9LQ8IVG5 1584 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 RALGAPBQ86X10 1494 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 ZFHX2Q9C0A1 2572 aaPredicted RBP2.41□□□□□ -2.02
VPS41-212ENST00000482217 IGLV4-69A0A075B6H9 119 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 A0A1W2PNU3 283 aaPredicted RBP2.41□□□□□ -2.02
VPS41-212ENST00000482217 FXYD1O00168 92 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 HMGN2P05204 90 aaKnown RBP2.41□□□□□ -2.02
VPS41-212ENST00000482217 SPINT3P49223 89 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 CDC42SE2Q9NRR3 84 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 V9GYH0 126 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 NRXN2Q9P2S2 1712 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 PCDH15Q96QU1 1955 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 SYCP2Q9BX26 1530 aa2.41□□□□□ -2.02
VPS41-212ENST00000482217 ZNF142P52746 1687 aaPredicted RBP2.41□□□□□ -2.02
VPS41-212ENST00000482217 CDC42BPGQ6DT37 1551 aa2.4□□□□□ -2.02
VPS41-212ENST00000482217 MYMXA0A1B0GTQ4 84 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms