RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 HERVK_113P63121 156 aa8.43□□□□□ -1.06
HPS4-212ENST00000481910 IGF2BP2-AS1Q96M15 143 aa8.43□□□□□ -1.06
HPS4-212ENST00000481910 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
HPS4-212ENST00000481910 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
HPS4-212ENST00000481910 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
HPS4-212ENST00000481910 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 E9PLD3 99 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 NCR2O95944 276 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 INSP01308 110 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 CENPWQ5EE01 88 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 PRR9Q5T870 116 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 CSNK1G2-AS1Q8NCQ2 148 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 RNASE7Q9H1E1 156 aaKnown RBP8.42□□□□□ -1.06
HPS4-212ENST00000481910 TRBV20OR9-2A0A075B6H5 130 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 IGHV3OR16-12A0A075B7B8 117 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 B9D2Q9BPU9 175 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 JPT2Q9H910 190 aa8.42□□□□□ -1.06
HPS4-212ENST00000481910 C1orf158Q8N1D5 194 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 SPRY2O43597 315 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 RBMY1A1P0DJD3 496 aaKnown RBP8.41□□□□□ -1.06
HPS4-212ENST00000481910 RBMY1CP0DJD4 496 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 NMUP48645 174 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 CD164Q04900 197 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 RBMY1FQ15415 496 aaKnown RBP8.41□□□□□ -1.06
HPS4-212ENST00000481910 Q5XG85 94 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 Q6ZQT7 251 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 C2orf91Q6ZV80 131 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
HPS4-212ENST00000481910 C9JCJ5 164 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
HPS4-212ENST00000481910 HTN1P15515 57 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
HPS4-212ENST00000481910 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
HPS4-212ENST00000481910 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 C9orf153Q5TBE3 101 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 OR10G8Q8NGN5 311 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 TM2D3Q9BRN9 247 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 OVOL2Q9BRP0 275 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 RETNQ9HD89 108 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 CRIP1P50238 77 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 TMEM258P61165 79 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
HPS4-212ENST00000481910 DPM2O94777 84 aa8.38□□□□□ -1.07
HPS4-212ENST00000481910 IMUPQ9GZP8 106 aa8.38□□□□□ -1.07
HPS4-212ENST00000481910 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
HPS4-212ENST00000481910 SH2D1AO60880 128 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 NDUFC2O95298 119 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 PRM2P04554 102 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 OR5AL1P0C617 328 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 RRN3P1Q2M238 152 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
HPS4-212ENST00000481910 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
HPS4-212ENST00000481910 CRYGAP11844 174 aa8.36□□□□□ -1.07
HPS4-212ENST00000481910 TEN1Q86WV5 123 aa8.36□□□□□ -1.07
HPS4-212ENST00000481910 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
HPS4-212ENST00000481910 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
HPS4-212ENST00000481910 NBEAL2Q6ZNJ1 2754 aa8.35□□□□□ -1.07
HPS4-212ENST00000481910 APCSP02743 223 aa8.35□□□□□ -1.07
HPS4-212ENST00000481910 MIFP14174 115 aa8.35□□□□□ -1.07
HPS4-212ENST00000481910 GAGE2AQ6NT46 116 aa8.35□□□□□ -1.07
HPS4-212ENST00000481910 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
HPS4-212ENST00000481910 DNAH3Q8TD57 4116 aa8.34□□□□□ -1.07
HPS4-212ENST00000481910 IGKV3D-20A0A0C4DH25 116 aa8.34□□□□□ -1.07
HPS4-212ENST00000481910 GNRH2O43555 120 aa8.34□□□□□ -1.07
HPS4-212ENST00000481910 HLA-DQA1P01909 254 aa8.34□□□□□ -1.07
HPS4-212ENST00000481910 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
HPS4-212ENST00000481910 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 C19orf71A6NCJ1 209 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 DEFB4AO15263 64 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 P01737 135 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 IL36BQ9NZH7 164 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 TMSB15BA0A087X1C1 80 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 ZNF493Q6ZR52 646 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 Q8NAQ8 132 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
HPS4-212ENST00000481910 C16orf74Q96GX8 76 aa8.33□□□□□ -1.08
HPS4-212ENST00000481910 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
HPS4-212ENST00000481910 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
HPS4-212ENST00000481910 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
HPS4-212ENST00000481910 PHLDA1Q8WV24 401 aaPredicted RBP8.32□□□□□ -1.08
HPS4-212ENST00000481910 IGLL5B9A064 214 aa8.31□□□□□ -1.08
HPS4-212ENST00000481910 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
HPS4-212ENST00000481910 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
HPS4-212ENST00000481910 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms