RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 MAGOHBQ96A72 148 aaKnown RBP-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 HSPB11Q9Y547 144 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 TNS1Q9HBL0 1735 aaKnown RBP-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 SRCAPQ6ZRS2 3230 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 DNAH9Q9NYC9 4486 aa-0.66□□□□□ -2.51
KDM1A-204ENST00000481879 PKD1L2Q7Z442 2459 aa-0.66□□□□□ -2.51
KDM1A-204ENST00000481879 CLPSL1A2RUU4 121 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 M0R129 80 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 PIRTP0C851 137 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 SPRR1AP35321 89 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 UBE2G1P62253 170 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 C9orf116Q5BN46 136 aaPredicted RBP-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 Q5VSD8 79 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 C10orf82Q8WW14 230 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 ZMYM4Q5VZL5 1548 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 MGAM2Q2M2H8 2515 aa-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 MYH9P35579 1960 aaKnown RBP-0.66□□□□□ -2.52
KDM1A-204ENST00000481879 VPS13BQ7Z7G8 4022 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 ERCC6Q03468 1493 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 GOLGA3Q08378 1498 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 UTP20O75691 2785 aaKnown RBP-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 ANKRD31Q8N7Z5 1873 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 LAMC1P11047 1609 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 PKD1P98161 4303 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 TRAV22A0A0B4J277 110 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 PIN1P1O15428 100 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 NBEAP1P0C6P0 100 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 NCS1P62166 190 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 Q8IZM0 81 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 RPRMQ9NS64 109 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 A0A0C4DFX4 3053 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 CSMD1Q96PZ7 3565 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.67□□□□□ -2.529e-8■■■■□ 23.1
KDM1A-204ENST00000481879 NHSL1Q5SYE7 1610 aa-0.67□□□□□ -2.52
KDM1A-204ENST00000481879 RELNP78509 3460 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 LAMB1P07942 1786 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 HELZP42694 1942 aaKnown RBP-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 SACSQ9NZJ4 4579 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 FAM236AA0A1B0GUQ0 79 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 FAM236BA0A1B0GV22 79 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 FAM92AA1XBS5 289 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 A6NIN4 97 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 LOC730098B7Z3J9 87 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 UBE2D1P51668 147 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 FER1L6Q2WGJ9 1857 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 SPANXN1Q5VSR9 72 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 RPL7L1Q6DKI1 246 aaKnown RBP-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 NBEAQ8NFP9 2946 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 CFAP46Q8IYW2 2715 aa-0.68□□□□□ -2.52
KDM1A-204ENST00000481879 PPRC1Q5VV67 1664 aaKnown RBP-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 USF3Q68DE3 2245 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 CASZ1Q86V15 1759 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 BCE1O60756 84 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 TNFP01375 233 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 Q5VV11 94 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 VSTM2AQ8TAG5 236 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 NPVFQ9HCQ7 196 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 SAR1AQ9NR31 198 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 SCN3BQ9NY72 215 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 CHD7Q9P2D1 2997 aa-0.69□□□□□ -2.52
KDM1A-204ENST00000481879 EYSQ5T1H1 3165 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 DNAH11Q96DT5 4516 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 DNAJC13O75165 2243 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 S100A5P33763 92 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 HAMPP81172 84 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 CCDC153Q494R4 210 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 BAGE3Q86Y29 109 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 SPTSSBQ8NFR3 76 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 SPRR2FQ96RM1 72 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 SELENOSQ9BQE4 189 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 DNAH1Q9P2D7 4330 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 ACACAQ13085 2346 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 SYNJ1O43426 1573 aa-0.7□□□□□ -2.52
KDM1A-204ENST00000481879 ZFHX3Q15911 3703 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 NBASA2RRP1 2371 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 GNG14A0A1W2PPG7 69 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 H0YJX3 145 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 NPFFO15130 113 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 PITX3O75364 302 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 DBIP07108 87 aaKnown RBP-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 IGLC6P0CF74 106 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 DEFA5Q01523 94 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 HIST1H1AQ02539 215 aaPredicted RBP-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 CFAP126Q5VTH2 177 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 MMGT1Q8N4V1 131 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 SMG1Q96Q15 3661 aaKnown RBP-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 MAP2P11137 1827 aaKnown RBP-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 BIVM-ERCC5R4GMW8 1640 aa-0.71□□□□□ -2.52
KDM1A-204ENST00000481879 KALRNO60229 2985 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 K7EQZ3 153 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 APOC4-APOC2K7ER74 178 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 SMIM6P0DI80 62 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 MORN2Q502X0 79 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 SPANXCQ9NY87 97 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 SPCS1Q9Y6A9 102 aa-0.72□□□□□ -2.52
KDM1A-204ENST00000481879 ARHGEF10O15013 1369 aa-0.72□□□□□ -2.53
KDM1A-204ENST00000481879 FRYQ5TBA9 3013 aa-0.72□□□□□ -2.53
KDM1A-204ENST00000481879 LYSTQ99698 3801 aa-0.73□□□□□ -2.53
KDM1A-204ENST00000481879 IFNA17P01571 189 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms