RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
PTPN7-212ENST00000480836 TRBV20OR9-2A0A075B6H5 130 aa8.41□□□□□ -1.06
PTPN7-212ENST00000480836 IGHV1-24A0A0C4DH33 117 aa8.41□□□□□ -1.06
PTPN7-212ENST00000480836 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
PTPN7-212ENST00000480836 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
PTPN7-212ENST00000480836 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
PTPN7-212ENST00000480836 TPPP3Q9BW30 176 aa8.41□□□□□ -1.06
PTPN7-212ENST00000480836 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 TMEM97Q5BJF2 176 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 FER1L6-AS1Q8NA97 138 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 CLRN3Q8NCR9 226 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 SMIM7Q9BQ49 75 aa8.4□□□□□ -1.06
PTPN7-212ENST00000480836 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
PTPN7-212ENST00000480836 PEA15Q15121 130 aa8.39□□□□□ -1.07
PTPN7-212ENST00000480836 P01737 135 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 NTF3P20783 257 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
PTPN7-212ENST00000480836 PKIAP61925 76 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 RASL11AQ6T310 242 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 SPACA4Q8TDM5 124 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 TMEM243Q9BU79 118 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 SMDT1Q9H4I9 107 aa8.38□□□□□ -1.07
PTPN7-212ENST00000480836 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 ZNF727A8MUV8 499 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 SRP19P09132 144 aaKnown RBP8.37□□□□□ -1.07
PTPN7-212ENST00000480836 Q6ZRU5 148 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 PRSS3P2Q8NHM4 247 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
PTPN7-212ENST00000480836 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 PHOX2AO14813 284 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 RPS20P60866 119 aaKnown RBP8.36□□□□□ -1.07
PTPN7-212ENST00000480836 COX6A2Q02221 97 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 CLLU1Q5K131 121 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.36□□□□□ -1.07
PTPN7-212ENST00000480836 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 TNXBP22105 4242 aa8.36□□□□□ -1.07
PTPN7-212ENST00000480836 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 GAS8-AS1O95177 125 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 CACNG7P62955 275 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 FAM74A3Q4VXF1 159 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 OCC1Q8TAD7 63 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 RPL39LQ96EH5 51 aaKnown RBP8.35□□□□□ -1.07
PTPN7-212ENST00000480836 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
PTPN7-212ENST00000480836 H7C1H1 209 aa8.34□□□□□ -1.07
PTPN7-212ENST00000480836 K7EN84 100 aa8.34□□□□□ -1.07
PTPN7-212ENST00000480836 IFITM2Q01629 132 aa8.34□□□□□ -1.07
PTPN7-212ENST00000480836 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
PTPN7-212ENST00000480836 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
PTPN7-212ENST00000480836 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.07
PTPN7-212ENST00000480836 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
PTPN7-212ENST00000480836 CTRLP40313 264 aa8.33□□□□□ -1.08
PTPN7-212ENST00000480836 AMTP48728 403 aa8.33□□□□□ -1.08
PTPN7-212ENST00000480836 SRSF3P84103 164 aaKnown RBP8.33□□□□□ -1.08
PTPN7-212ENST00000480836 GTSF1Q8WW33 167 aa8.33□□□□□ -1.08
PTPN7-212ENST00000480836 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
PTPN7-212ENST00000480836 RNASE7Q9H1E1 156 aaKnown RBP8.33□□□□□ -1.08
PTPN7-212ENST00000480836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-212ENST00000480836 IGKV2-29A2NJV5 120 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-212ENST00000480836 C9JQL5 133 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 F2Z2F3 143 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
PTPN7-212ENST00000480836 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 FAM231DQ6ZW35 169 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 CHCHD10Q8WYQ3 142 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-212ENST00000480836 CNFNQ9BYD5 112 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 NAT8Q9UHE5 227 aa8.32□□□□□ -1.08
PTPN7-212ENST00000480836 A0A096LNI7 61 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 IGKV2-24A0A0C4DH68 120 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 COTL1Q14019 142 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 TWIST1Q15672 202 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 ADIRFQ15847 76 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 RNF185Q96GF1 192 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
PTPN7-212ENST00000480836 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
PTPN7-212ENST00000480836 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
PTPN7-212ENST00000480836 RPS10P46783 165 aaKnown RBP8.3□□□□□ -1.08
PTPN7-212ENST00000480836 FOXI1Q12951 378 aa8.3□□□□□ -1.08
PTPN7-212ENST00000480836 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
PTPN7-212ENST00000480836 WDR73Q6P4I2 378 aa8.3□□□□□ -1.08
PTPN7-212ENST00000480836 A8MWL6 223 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 UBE2L6O14933 153 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 RPL23P62829 140 aaKnown RBP8.29□□□□□ -1.08
PTPN7-212ENST00000480836 CT83Q5H943 113 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 OSTCQ9NRP0 149 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 LRP2P98164 4655 aa8.29□□□□□ -1.08
PTPN7-212ENST00000480836 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
PTPN7-212ENST00000480836 FGF6P10767 208 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms