RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 E7EUB6 86 aa4.65□□□□□ -1.66
PRPF4B-205ENST00000480058 M0QY20 66 aa4.65□□□□□ -1.66
PRPF4B-205ENST00000480058 GYPEP15421 78 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 ZFAND3Q9H8U3 227 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 CDKN2A-AS1Q9UH64 79 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 TRPM7Q96QT4 1865 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 IGKV2D-26A0A0A0MRZ7 120 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 IGLV2-11P01706 119 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 MTORP42345 2549 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 LRRK2Q5S007 2527 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 LY6DQ14210 128 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 FN1P02751 2386 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 PIEZO2Q9H5I5 2752 aa4.65□□□□□ -1.67
PRPF4B-205ENST00000480058 KLLNB2CW77 178 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 LINC00310P59036 64 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 IGHV4-61A0A0C4DH41 118 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 MSMPQ1L6U9 139 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 LY6LH3BQJ8 138 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 IGHV4-59P01825 116 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 LMO4P61968 165 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 BLCAPP62952 87 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 CCDC140Q96MF4 163 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 BCE1O60756 84 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 LINC00526Q96FQ7 95 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 CHCHD7Q9BUK0 85 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 TRIAP1O43715 76 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 UBE2D3P61077 147 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 UBE2D2P62837 147 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
PRPF4B-205ENST00000480058 CCL18P55774 89 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 C14orf177Q52M58 125 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 FAM19A3Q7Z5A8 133 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 Q8N6K4 173 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 NRACQ8N912 160 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 MRAPQ8TCY5 172 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 UBE2BP63146 152 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 CLEC2BQ92478 149 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 TEX49A0A1B0GTD5 131 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 DYSFO75923 2080 aa4.63□□□□□ -1.67
PRPF4B-205ENST00000480058 C3orf56Q8N813 242 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 Q8N976 141 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 MRPL55Q7Z7F7 128 aaKnown RBP4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 RNASE13Q5GAN3 156 aaKnown RBP4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 MAPKAPK5-AS1Q8N8E1 139 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 UPK3BQ9BT76 320 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 PRB4P10163 310 aaPredicted RBP4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 XGP55808 180 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 CRIP1P50238 77 aa4.62□□□□□ -1.67
PRPF4B-205ENST00000480058 RS1O15537 224 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 KIR2DL5BQ8NHK3 375 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 C4orf3Q8WVX3 66 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 CSDC2Q9Y534 153 aaKnown RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 IGKV2D-24A0A075B6R9 120 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 WFDC9Q8NEX5 89 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 C9orf85Q96MD7 179 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 YLPM1P49750 1951 aaKnown RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 NLRC5Q86WI3 1866 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 C20orf173Q96LM9 149 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 C14orf132Q9NPU4 83 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 FNDC1Q4ZHG4 1894 aaPredicted RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 CRIP2P52943 208 aaPredicted RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 COX17Q14061 63 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 IGIPA6NJ69 53 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 TANC1Q9C0D5 1861 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 MRPS12O15235 138 aaKnown RBP4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 UNQ9165/PRO28630Q6UXU0 137 aa4.61□□□□□ -1.67
PRPF4B-205ENST00000480058 CLPSL1A2RUU4 121 aa4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 RITA1Q96K30 269 aa4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 PSMG3-AS1Q96PY0 264 aa4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 CFHR3Q02985 330 aa4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 MAP6D1Q9H9H5 199 aa4.6□□□□□ -1.67
PRPF4B-205ENST00000480058 COL4A3Q01955 1670 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 TRAV7A0A075B6U4 112 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 CRYGDP07320 174 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 CD164L2Q6UWJ8 174 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 UBE2AP49459 152 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 XIRP1Q702N8 1843 aaKnown RBP4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 DEFB113Q30KQ7 82 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 SPRNQ5BIV9 151 aa4.59□□□□□ -1.67
PRPF4B-205ENST00000480058 A0A1B0GW54 56 aa4.59□□□□□ -1.68
PRPF4B-205ENST00000480058 DHRS4-AS1Q9P1J3 65 aa4.59□□□□□ -1.68
PRPF4B-205ENST00000480058 TRBV6-8A0A0A6YYG3 113 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 RNASE3P12724 160 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 ASPHD1Q5U4P2 390 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 COL4A4P53420 1690 aaPredicted RBP4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 DEFB114Q30KQ6 69 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 URB1-AS1Q96HZ7 61 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 F8WDY8 70 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 Q96MF0 132 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 IGHV4-38-2P0DP08 117 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms