RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 IGHV4-4A0A075B6R2 117 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 K7EQD1 137 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 SMIM13P0DJ93 91 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 TP53TG1Q9Y2A0 90 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 FABP2P12104 132 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 TDRG1Q3Y452 100 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 TMEM141Q96I45 108 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 IGHV3-38A0A0C4DH36 116 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 Q8N1Y9 231 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 LAMA1P25391 3075 aa4.42□□□□□ -1.7
CPS1-207ENST00000479988 TRAV8-3A0A0A6YYJ7 113 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 GNRH2O43555 120 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 MPV17L2Q567V2 206 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 TRAV8-2A0A0B4J237 113 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 PRSS29PA6NIE9 313 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 I3L3M4 83 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 AMTNQ6UX39 209 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 WFDC9Q8NEX5 89 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 C11orf68Q9H3H3 251 aaKnown RBP4.41□□□□□ -1.7
CPS1-207ENST00000479988 MSRB1Q9NZV6 116 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 TRAV4A0A0B4J268 109 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 F8VRH5 84 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 NPSP0C0P6 89 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 RPL13AP40429 203 aaKnown RBP4.41□□□□□ -1.7
CPS1-207ENST00000479988 TCTAP57738 103 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 DEFB1P60022 68 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 UBE2BP63146 152 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 ODF3L2Q3SX64 289 aa4.41□□□□□ -1.7
CPS1-207ENST00000479988 KPRPQ5T749 579 aaPredicted RBP4.41□□□□□ -1.7
CPS1-207ENST00000479988 XIRP2A4UGR9 3374 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 CRYGDP07320 174 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.7
CPS1-207ENST00000479988 TAL2Q16559 108 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 C2orf66Q6UXQ4 117 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.7
CPS1-207ENST00000479988 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 CDIP1Q9H305 208 aa4.4□□□□□ -1.7
CPS1-207ENST00000479988 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.7
CPS1-207ENST00000479988 C3orf84H3BNL1 204 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 FHL3Q13643 280 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 ZFAND2AQ8N6M9 145 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 RASL10AQ92737 203 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 TRAV12-1A0A0B4J245 112 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 SDHAF1A6NFY7 115 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
CPS1-207ENST00000479988 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
CPS1-207ENST00000479988 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 KLK12Q9UKR0 248 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 Q6ZTI0 123 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 MGAQ8IWI9 3026 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 TRBV10-1A0A0K0K1A3 114 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 Q8N976 141 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 LINC00158P58513 81 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 STPG4Q8N801 248 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 HIGD1BQ9P298 99 aa4.39□□□□□ -1.71
CPS1-207ENST00000479988 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 PMVKQ15126 192 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 BVES-AS1Q5T3Y7 98 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 DEFB104AQ8WTQ1 72 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 RNF185Q96GF1 192 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 URB1-AS1Q96HZ7 61 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 PLEKHB2Q96CS7 222 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
CPS1-207ENST00000479988 C1orf134Q5TEV5 83 aa4.38□□□□□ -1.71
CPS1-207ENST00000479988 KLLNB2CW77 178 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 SLC25A20O43772 301 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 S100A7L2Q5SY68 101 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 C20orf173Q96LM9 149 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 JPT2Q9H910 190 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 K7EP13 123 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 NXPH4O95158 308 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 GATA1P15976 413 aaPredicted RBP4.37□□□□□ -1.71
CPS1-207ENST00000479988 XCL1P47992 114 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 PSMB2P49721 201 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 CEMP1Q6PRD7 247 aaPredicted RBP4.37□□□□□ -1.71
CPS1-207ENST00000479988 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 DKK2Q9UBU2 259 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 ZNF815PA8K554 130 aa4.37□□□□□ -1.71
CPS1-207ENST00000479988 SOCS3O14543 225 aa4.36□□□□□ -1.71
CPS1-207ENST00000479988 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
CPS1-207ENST00000479988 Q6ZTC4 211 aa4.36□□□□□ -1.71
CPS1-207ENST00000479988 GTSF1LQ9H1H1 148 aa4.36□□□□□ -1.71
CPS1-207ENST00000479988 RBMY1BA6NDE4 496 aaKnown RBP4.36□□□□□ -1.71
CPS1-207ENST00000479988 RBMY1EA6NEQ0 496 aaKnown RBP4.36□□□□□ -1.71
CPS1-207ENST00000479988 RBMY1DP0C7P1 496 aaKnown RBP4.36□□□□□ -1.71
CPS1-207ENST00000479988 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms