RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 IGHG2P01859 326 aa15.24■□□□□ 0.03
COL13A1-208ENST00000479733 CUBNO60494 3623 aa15.24■□□□□ 0.03
COL13A1-208ENST00000479733 A0A0J9YX75 114 aa15.23■□□□□ 0.03
COL13A1-208ENST00000479733 SMIM20Q8N5G0 67 aa15.23■□□□□ 0.03
COL13A1-208ENST00000479733 FAM104AQ969W3 186 aa15.23■□□□□ 0.03
COL13A1-208ENST00000479733 C10orf99Q6UWK7 81 aa15.22■□□□□ 0.03
COL13A1-208ENST00000479733 NACAE9PAV3 2078 aa15.21■□□□□ 0.03
COL13A1-208ENST00000479733 A0A0U1RRA0 63 aa15.21■□□□□ 0.03
COL13A1-208ENST00000479733 IGHV1-58A0A0C4DH39 117 aa15.21■□□□□ 0.03
COL13A1-208ENST00000479733 DUX5Q96PT3 197 aa15.21■□□□□ 0.03
COL13A1-208ENST00000479733 CHCHD5Q9BSY4 110 aa15.2■□□□□ 0.02
COL13A1-208ENST00000479733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.2■□□□□ 0.02
COL13A1-208ENST00000479733 IGKV2-29A2NJV5 120 aaPredicted RBP15.2■□□□□ 0.02
COL13A1-208ENST00000479733 SNRPD3P62318 126 aaKnown RBP15.2■□□□□ 0.02
COL13A1-208ENST00000479733 MRPS36P82909 103 aaKnown RBP15.2■□□□□ 0.02
COL13A1-208ENST00000479733 MIAQ16674 131 aa15.19■□□□□ 0.02
COL13A1-208ENST00000479733 CELSR2Q9HCU4 2923 aa15.19■□□□□ 0.02
COL13A1-208ENST00000479733 Q6Q795 121 aa15.18■□□□□ 0.02
COL13A1-208ENST00000479733 IGHV3-38A0A0C4DH36 116 aa15.18■□□□□ 0.02
COL13A1-208ENST00000479733 MEIG1Q5JSS6 88 aa15.18■□□□□ 0.02
COL13A1-208ENST00000479733 ZNF625Q96I27 306 aaPredicted RBP15.18■□□□□ 0.02
COL13A1-208ENST00000479733 VSIG2Q96IQ7 327 aa15.18■□□□□ 0.02
COL13A1-208ENST00000479733 TNFRSF18Q9Y5U5 241 aa15.18■□□□□ 0.02
COL13A1-208ENST00000479733 TRGV11A0A075B6L2 103 aa15.17■□□□□ 0.02
COL13A1-208ENST00000479733 CHD8Q9HCK8 2581 aa15.17■□□□□ 0.02
COL13A1-208ENST00000479733 NCOR2Q9Y618 2525 aa15.17■□□□□ 0.02
COL13A1-208ENST00000479733 CSMD2Q7Z408 3487 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 H3BUA1 57 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 IGLV1-40P01703 118 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 TMEM61Q8N0U2 210 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 IGHV4-61A0A0C4DH41 118 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 H3BT86 120 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 HERV-K104P63124 156 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 SPANXDQ9BXN6 97 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 SPANXCQ9NY87 97 aa15.16■□□□□ 0.02
COL13A1-208ENST00000479733 LST1O00453 97 aa15.15■□□□□ 0.02
COL13A1-208ENST00000479733 A6NDX4 124 aa15.15■□□□□ 0.02
COL13A1-208ENST00000479733 C2CD3Q4AC94 2353 aa15.14■□□□□ 0.01
COL13A1-208ENST00000479733 K7EMT4 169 aa15.14■□□□□ 0.01
COL13A1-208ENST00000479733 RBMY1A1P0DJD3 496 aaKnown RBP15.14■□□□□ 0.01
COL13A1-208ENST00000479733 RBMY1CP0DJD4 496 aa15.14■□□□□ 0.01
COL13A1-208ENST00000479733 RBMY1FQ15415 496 aaKnown RBP15.14■□□□□ 0.01
COL13A1-208ENST00000479733 Q6ZSN1 163 aa15.14■□□□□ 0.01
COL13A1-208ENST00000479733 NOTCH3Q9UM47 2321 aa15.14■□□□□ 0.01
COL13A1-208ENST00000479733 SYNJ2BPP57105 145 aa15.13■□□□□ 0.01
COL13A1-208ENST00000479733 PYGO1Q9Y3Y4 419 aa15.13■□□□□ 0.01
COL13A1-208ENST00000479733 KLRB1Q12918 225 aa15.13■□□□□ 0.01
COL13A1-208ENST00000479733 CDKN2A-AS1Q9UH64 79 aa15.13■□□□□ 0.01
COL13A1-208ENST00000479733 BRI3O95415 125 aa15.12■□□□□ 0.01
COL13A1-208ENST00000479733 SHISA2Q6UWI4 295 aa15.12■□□□□ 0.01
COL13A1-208ENST00000479733 LINC01600Q96MT4 127 aa15.12■□□□□ 0.01
COL13A1-208ENST00000479733 K7EQG2 157 aa15.11■□□□□ 0.01
COL13A1-208ENST00000479733 LINC00467Q9BRT7 94 aa15.1■□□□□ 0.01
COL13A1-208ENST00000479733 TINCRA0A1B0GVN0 87 aa15.1■□□□□ 0.01
COL13A1-208ENST00000479733 UBE2D4Q9Y2X8 147 aa15.1■□□□□ 0.01
COL13A1-208ENST00000479733 CHCHD7Q9BUK0 85 aa15.09■□□□□ 0.01
COL13A1-208ENST00000479733 C19orf84I3L1E1 186 aa15.09■□□□□ 0.01
COL13A1-208ENST00000479733 CITED2Q99967 270 aaPredicted RBP15.09■□□□□ 0.01
COL13A1-208ENST00000479733 YAE1D1Q9NRH1 226 aa15.09■□□□□ 0.01
COL13A1-208ENST00000479733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.08■□□□□ 0
COL13A1-208ENST00000479733 FAM236AA0A1B0GUQ0 79 aa15.06■□□□□ 0
COL13A1-208ENST00000479733 FAM236BA0A1B0GV22 79 aa15.06■□□□□ 0
COL13A1-208ENST00000479733 CFHR3Q02985 330 aa15.06■□□□□ 0
COL13A1-208ENST00000479733 TMEM101Q96IK0 257 aa15.06■□□□□ 0
COL13A1-208ENST00000479733 Q9H8V8 135 aa15.06■□□□□ 0
COL13A1-208ENST00000479733 PSMB8P28062 276 aa15.05■□□□□ 0
COL13A1-208ENST00000479733 COX6A2Q02221 97 aa15.05■□□□□ 0
COL13A1-208ENST00000479733 DGAT2L7PQ6IED9 249 aa15.05■□□□□ 0
COL13A1-208ENST00000479733 USP9YO00507 2555 aaPredicted RBP15.04■□□□□ -0
COL13A1-208ENST00000479733 AVPP01185 164 aa15.04■□□□□ -0
COL13A1-208ENST00000479733 Q8N2B8 174 aa15.04■□□□□ -0
COL13A1-208ENST00000479733 FAM240AA0A1B0GVK7 77 aa15.04■□□□□ -0
COL13A1-208ENST00000479733 MRPL23Q16540 153 aaKnown RBP15.03■□□□□ -0
COL13A1-208ENST00000479733 SPANXA1Q9NS26 97 aa15.03■□□□□ -0
COL13A1-208ENST00000479733 DEFB131AP59861 70 aa15.03■□□□□ -0
COL13A1-208ENST00000479733 LINC00308Q8TCZ7 52 aa15.03■□□□□ -0
COL13A1-208ENST00000479733 NDUFA7O95182 113 aa15.03■□□□□ -0
COL13A1-208ENST00000479733 CIRBPQ14011 172 aaKnown RBP15.03■□□□□ -0
COL13A1-208ENST00000479733 FAM110AQ9BQ89 295 aa15.03■□□□□ -0
COL13A1-208ENST00000479733 IGHV4-59P01825 116 aa15.02■□□□□ -0
COL13A1-208ENST00000479733 DEFB121Q5J5C9 76 aa15.02■□□□□ -0
COL13A1-208ENST00000479733 PIMREGQ9BSJ6 248 aa15.02■□□□□ -0
COL13A1-208ENST00000479733 ZANQ9Y493 2812 aa15.01□□□□□ -0.01
COL13A1-208ENST00000479733 SMCR5Q8TEV8 140 aa15.01□□□□□ -0.01
COL13A1-208ENST00000479733 LY6DQ14210 128 aa15□□□□□ -0.01
COL13A1-208ENST00000479733 TRBV7-7A0A0K0K1E9 115 aa14.99□□□□□ -0.01
COL13A1-208ENST00000479733 NDUFA1O15239 70 aa14.99□□□□□ -0.01
COL13A1-208ENST00000479733 IGHV4-30-2A0A087WSY4 118 aa14.99□□□□□ -0.01
COL13A1-208ENST00000479733 DAZ2Q13117 558 aaKnown RBP14.99□□□□□ -0.01
COL13A1-208ENST00000479733 SOSTDC1Q6X4U4 206 aa14.99□□□□□ -0.01
COL13A1-208ENST00000479733 DAZ4Q86SG3 579 aaKnown RBP14.99□□□□□ -0.01
COL13A1-208ENST00000479733 DAZ3Q9NR90 486 aaKnown RBP14.99□□□□□ -0.01
COL13A1-208ENST00000479733 TRAV13-1A0A0B4J241 112 aa14.98□□□□□ -0.01
COL13A1-208ENST00000479733 COX7A2LO14548 114 aa14.97□□□□□ -0.01
COL13A1-208ENST00000479733 TIMM17BO60830 172 aa14.97□□□□□ -0.01
COL13A1-208ENST00000479733 HOXD3P31249 432 aaPredicted RBP14.97□□□□□ -0.01
COL13A1-208ENST00000479733 LINC01587Q99440 93 aa14.97□□□□□ -0.01
COL13A1-208ENST00000479733 ITPR1Q14643 2758 aa14.97□□□□□ -0.01
COL13A1-208ENST00000479733 IGHV3OR16-12A0A075B7B8 117 aa14.96□□□□□ -0.01
COL13A1-208ENST00000479733 RBMY1BA6NDE4 496 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms