RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SEC11AP67812 179 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 OCIAD2Q56VL3 154 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 TPTE2P1Q5T6R2 138 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 TMEM14EPQ6UXP3 125 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 Q6ZRU5 148 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 FA2HQ7L5A8 372 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 TMEM144Q7Z5S9 345 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 BPIFA4PQ86YQ2 179 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 TMEM256Q8N2U0 113 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 C8orf31Q8N9H6 132 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 OR5A1Q8NGJ0 315 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 LRRC29Q8WV35 223 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 GALMQ96C23 342 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 HSD17B10Q99714 261 aaKnown RBP2.67□□□□□ -1.98
CCDC171-207ENST00000478913 NPCDR1Q9BY65 106 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 OR2H1Q9GZK4 316 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 MS4A6AQ9H2W1 248 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 OSTCQ9NRP0 149 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 WASHC3Q9Y3C0 194 aa2.67□□□□□ -1.98
CCDC171-207ENST00000478913 IGKV1D-43A0A0B4J1Z2 117 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 J3QT63 122 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 CDIPTO14735 213 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 SIVA1O15304 175 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 YPEL1O60688 119 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 HLA-DRB1P01911 266 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 HBZP02008 142 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 SCTP09683 121 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 NBEAP1P0C6P0 100 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 MGST1P10620 155 aaKnown RBP2.66□□□□□ -1.98
CCDC171-207ENST00000478913 SRIP30626 198 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 REG1BP48304 166 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 EDDM3BP56851 147 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 RPL37AP61513 92 aaKnown RBP2.66□□□□□ -1.98
CCDC171-207ENST00000478913 RBX1P62877 108 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 HIST1H1AQ02539 215 aaPredicted RBP2.66□□□□□ -1.98
CCDC171-207ENST00000478913 Q56UQ5 140 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 GCSAMLQ5JQS6 135 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 LDLRAD2Q5SZI1 272 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 TMEM42Q69YG0 159 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 ATP5L2Q7Z4Y8 100 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 S100A7AQ86SG5 101 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 OR8I2Q8N0Y5 310 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 LY6G5BQ8NDX9 201 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 OR4P4Q8NGL7 312 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 EEF1AKMT3Q96AZ1 226 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 CHCHD1Q96BP2 118 aaKnown RBP2.66□□□□□ -1.98
CCDC171-207ENST00000478913 YPEL2Q96QA6 119 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 RNF5Q99942 180 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 CST9LQ9H4G1 147 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 VSIRQ9H7M9 311 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 NPVFQ9HCQ7 196 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 SMPXQ9UHP9 88 aa2.66□□□□□ -1.98
CCDC171-207ENST00000478913 IGLC7A0M8Q6 106 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 C5orf49A4QMS7 147 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 FNDC10F2Z333 226 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 CCL25O15444 150 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 LEPROTL1O95214 131 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 CA2P00918 260 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 IL4P05112 153 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 C3orf79P0CE67 100 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 ARL14EPLP0DKL9 152 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 SMIM17P0DL12 118 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 FABP2P12104 132 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 HTR1DP28221 377 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 GCHFRP30047 84 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 CSN1S1P47710 185 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 RPL31P62899 125 aaKnown RBP2.65□□□□□ -1.99
CCDC171-207ENST00000478913 AESQ08117 197 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF816Q0VGE8 651 aaPredicted RBP2.65□□□□□ -1.99
CCDC171-207ENST00000478913 TNXAQ16473 311 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 MRPL23Q16540 153 aaKnown RBP2.65□□□□□ -1.99
CCDC171-207ENST00000478913 SMIM21Q3B7S5 101 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 KRTAP13-2Q52LG2 175 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 IBA57Q5T440 356 aaKnown RBP2.65□□□□□ -1.99
CCDC171-207ENST00000478913 SAMD13Q5VXD3 122 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 ZIC4Q8N9L1 334 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 OR52E5Q8NH55 327 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 PTH2Q96A98 100 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 ADTRPQ96IZ2 230 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 MRPL32Q9BYC8 188 aaKnown RBP2.65□□□□□ -1.99
CCDC171-207ENST00000478913 OR2D2Q9H210 308 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 HILPDAQ9Y5L2 63 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 OR51B2Q9Y5P1 312 aa2.65□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-27A0A075B6S5 117 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 TRAV38-1A0A0B4J264 116 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-12A0A0C4DH73 117 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 A0A1W2PRE2 83 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 SMIM27A0A1W2PRY6 76 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 OR4C46A6NHA9 309 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 A8MWL6 223 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 LINC01619G3V211 115 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 SMKR1H3BMG3 65 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 M0QXV9 152 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CORTO00230 105 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 SLC17A3O00476 420 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-5P01602 117 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1D-12P01611 117 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CT45A6P0DMU7 189 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CT45A5P0DMU8 189 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CT45A7P0DMV0 189 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms