RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CACFD1Q9UGQ2 172 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 CACNA1AO00555 2505 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MAP3K1Q13233 1512 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 WNK3Q9BYP7 1800 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 SPTBP11277 2137 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 DOCK11Q5JSL3 2073 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MAGI2Q86UL8 1455 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 MON2Q7Z3U7 1717 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 CEP162Q5TB80 1403 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 UACAQ9BZF9 1416 aa1.49□□□□□ -2.17
SMARCA1-204ENST00000478420 VWDEQ8N2E2 1590 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 CYB5AP00167 134 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 APOC3P02656 99 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 FXYD4P59646 89 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 DEFB103AP81534 67 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SSBP1Q04837 148 aaKnown RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 TRGV9Q99603 122 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 NDUFA4L2Q9NRX3 87 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 MED9Q9NWA0 146 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 BLMP54132 1417 aaPredicted RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 TET1Q8NFU7 2136 aa1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 PHRF1Q9P1Y6 1649 aaKnown RBP1.48□□□□□ -2.17
SMARCA1-204ENST00000478420 SBF2Q86WG5 1849 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 DLEC1Q9Y238 1755 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 DCAF1Q9Y4B6 1507 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 MYH8P13535 1937 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 A0A087WTM6 91 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 TRBV6-7A0A0A0MS04 114 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 H7BZZ5 65 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 NDUFC1O43677 76 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 KRTAP12-1P59990 96 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 Q8N6K4 173 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 COX7B2Q8TF08 81 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 S100A16Q96FQ6 103 aaKnown RBP1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 OBSCN-AS1Q96MR7 158 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 PRO1854Q9UHT4 67 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 SNURFQ9Y675 71 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 ERVK-7P63135 1459 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 PKD1L2Q7Z442 2459 aa1.47□□□□□ -2.17
SMARCA1-204ENST00000478420 OTOGLQ3ZCN5 2332 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 PI4KAP42356 2102 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 RREB1Q92766 1687 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 MLH3Q9UHC1 1453 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2-40A0A087WW87 121 aaPredicted RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 A0A0G2JND7 137 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 IGKV2D-40P01614 121 aaPredicted RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 EDDM3BP56851 147 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 ELOF1P60002 83 aaKnown RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 GDF5OSQ5U4N7 250 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 XAF1Q6GPH4 301 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 CDC42SE2Q9NRR3 84 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 LENEPQ9Y5L5 61 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 RRBP1Q9P2E9 1410 aaKnown RBP1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 NRXN2Q9P2S2 1712 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 SORL1Q92673 2214 aa1.46□□□□□ -2.18
SMARCA1-204ENST00000478420 EPRSP07814 1512 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 COL4A6Q14031 1691 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 TNRC6BQ9UPQ9 1833 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 TCHHQ07283 1943 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 IGLC7A0M8Q6 106 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 C10orf142B7Z368 130 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 HMGN4O00479 90 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PPP1R17O96001 155 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PCOTHQ58A44 107 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 ALKAL2Q6UX46 152 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 VMO1Q7Z5L0 202 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 DYNLRB1Q9NP97 96 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 NXT2Q9NPJ8 142 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCR10Q9UDW1 63 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 PLIN4Q96Q06 1357 aa1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 CDK13Q14004 1512 aaKnown RBP1.45□□□□□ -2.18
SMARCA1-204ENST00000478420 MRC1P22897 1456 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 MED12Q93074 2177 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 GBF1Q92538 1859 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCRHLA0A096LP55 91 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UQCRHP07919 91 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 HIGD1BQ9P298 99 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 PARP14Q460N5 1801 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 SDK1Q7Z5N4 2213 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 TOP2BQ02880 1626 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 MUC6Q6W4X9 2439 aa1.44□□□□□ -2.18
SMARCA1-204ENST00000478420 EDC4Q6P2E9 1401 aaKnown RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 INTS1Q8N201 2190 aaKnown RBP1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FXYD1O00168 92 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 COX6CP09669 75 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 CCL18P55774 89 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 C6orf52Q5T4I8 152 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FAM74A4Q5TZK3 123 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 ZNF720Q7Z2F6 126 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 FAM223AQ8IWN6 122 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 S100A13Q99584 98 aa1.43□□□□□ -2.18
SMARCA1-204ENST00000478420 ATP10BO94823 1461 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms