RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 ENKURQ8TC29 256 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 S100ZQ8WXG8 99 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 PTH2Q96A98 100 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 FXYD5Q96DB9 178 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 OTORQ9NRC9 128 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 MBD2Q9UBB5 411 aa3.62□□□□□ -1.83
LINC00173-202ENST00000477702 TRAV1-1A0A0B4J248 108 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 PLA2G10O15496 165 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 SSNA1O43805 119 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 S100A4P26447 101 aaKnown RBP3.61□□□□□ -1.83
LINC00173-202ENST00000477702 ZNF80P51504 273 aaPredicted RBP3.61□□□□□ -1.83
LINC00173-202ENST00000477702 UBE2D1P51668 147 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 REG3AQ06141 175 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 GOLT1AQ6ZVE7 132 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.61□□□□□ -1.83
LINC00173-202ENST00000477702 FER1L6-AS1Q8NA97 138 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 SUN5Q8TC36 379 aa3.61□□□□□ -1.83
LINC00173-202ENST00000477702 OPRPNQ99935 248 aaPredicted RBP3.61□□□□□ -1.83
LINC00173-202ENST00000477702 WDR61Q9GZS3 305 aaKnown RBP3.61□□□□□ -1.83
LINC00173-202ENST00000477702 TRBV7-3A0A075B6L6 115 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 DEFA1P59665 94 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 DEFA3P59666 94 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 IL15RAQ13261 267 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 SAPCD1Q5SSQ6 148 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 LINC00299Q6ZSB3 139 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 SDHCQ99643 169 aaPredicted RBP3.6□□□□□ -1.83
LINC00173-202ENST00000477702 RETNLBQ9BQ08 111 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 C11orf1Q9H5F2 150 aa3.6□□□□□ -1.83
LINC00173-202ENST00000477702 IGLV7-46A0A075B6I9 117 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 KRTAP16-1A8MUX0 517 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 H0Y9J4 135 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 SIX6O95475 246 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 GCGP01275 180 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 MBP02144 154 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
LINC00173-202ENST00000477702 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
LINC00173-202ENST00000477702 PKIAP61925 76 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 SMUG1Q53HV7 270 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 PPP1R1CQ8WVI7 109 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 ALKBH7Q9BT30 221 aaPredicted RBP3.59□□□□□ -1.83
LINC00173-202ENST00000477702 OR5AC2Q9NZP5 309 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 LINC00474Q9P2X8 69 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 HSPB11Q9Y547 144 aa3.59□□□□□ -1.83
LINC00173-202ENST00000477702 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 INMT-MINDY4F8WBC2 141 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 EIF3GO75821 320 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00173-202ENST00000477702 MPC2O95563 127 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 CRYGAP11844 174 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 RAB2AP61019 212 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 GNG5P63218 68 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 C5orf17Q8NAS9 161 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 SMIM3Q9BZL3 60 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 TMEM167BQ9NRX6 74 aa3.58□□□□□ -1.84
LINC00173-202ENST00000477702 A0A087WZ39 114 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 TRAV8-4A0A0B4J246 113 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 FABP5P3A8MUU1 101 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 H3BVH4 76 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 H7C423 109 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 CXorf1O96002 111 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 P01737 135 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 RPL13AP40429 203 aaKnown RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 CDC34P49427 236 aaPredicted RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 SERF2P84101 59 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 FLI1Q01543 452 aaPredicted RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 PRNTQ86SH4 94 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 C20orf203Q8NBC4 194 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 NKX6-2Q9C056 277 aaPredicted RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 ACTR3CQ9C0K3 210 aaPredicted RBP3.57□□□□□ -1.84
LINC00173-202ENST00000477702 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
LINC00173-202ENST00000477702 IGLV4-60A0A075B6I1 120 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 IGKV3OR2-268A0A0C4DH90 116 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 A4D1N5 150 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 HMGB3O15347 200 aaKnown RBP3.56□□□□□ -1.84
LINC00173-202ENST00000477702 UPK1BO75841 260 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 TCRAP04437 139 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 ARL14EPLP0DKL9 152 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 GZMBP10144 247 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 EIF5AP63241 154 aaKnown RBP3.56□□□□□ -1.84
LINC00173-202ENST00000477702 SFRP2Q96HF1 295 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 DERL1Q9BUN8 251 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 BATF3Q9NR55 127 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 EPDR1Q9UM22 224 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 PSG8Q9UQ74 426 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
LINC00173-202ENST00000477702 GVQW2A0A096LPI5 108 aaPredicted RBP3.55□□□□□ -1.84
LINC00173-202ENST00000477702 BORCS7-ASMTA0A0B4J1R7 106 aa3.55□□□□□ -1.84
LINC00173-202ENST00000477702 GRIFINA4D1Z8 144 aa3.55□□□□□ -1.84
LINC00173-202ENST00000477702 B4DEV8 164 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms