RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 F2Z2F3 143 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 CTRLP40313 264 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 LYZL1Q6UWQ5 148 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 C9orf62Q8N4C0 152 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 CNFNQ9BYD5 112 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
MRPL55-228ENST00000476267 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-228ENST00000476267 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
MRPL55-228ENST00000476267 NTF3P20783 257 aa8.27□□□□□ -1.09
MRPL55-228ENST00000476267 GNG4P50150 75 aa8.27□□□□□ -1.09
MRPL55-228ENST00000476267 RAB5CP51148 216 aa8.27□□□□□ -1.09
MRPL55-228ENST00000476267 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
MRPL55-228ENST00000476267 PHOX2AO14813 284 aa8.26□□□□□ -1.09
MRPL55-228ENST00000476267 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
MRPL55-228ENST00000476267 MEF2BQ02080 365 aaPredicted RBP8.26□□□□□ -1.09
MRPL55-228ENST00000476267 WDR73Q6P4I2 378 aa8.26□□□□□ -1.09
MRPL55-228ENST00000476267 XKRY2A2RUG3 117 aa8.25□□□□□ -1.09
MRPL55-228ENST00000476267 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
MRPL55-228ENST00000476267 AMTP48728 403 aa8.25□□□□□ -1.09
MRPL55-228ENST00000476267 COTL1Q14019 142 aa8.25□□□□□ -1.09
MRPL55-228ENST00000476267 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
MRPL55-228ENST00000476267 UBE2L6O14933 153 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 PDE6DO43924 150 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 IFNA1P01562 189 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 COX6A2Q02221 97 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 Q6ZNX1 250 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 NUDT10Q8NFP7 164 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 NUDT11Q96G61 164 aa8.24□□□□□ -1.09
MRPL55-228ENST00000476267 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
MRPL55-228ENST00000476267 TRAV26-2A0A0B4J265 109 aa8.23□□□□□ -1.09
MRPL55-228ENST00000476267 NDUFS6O75380 124 aaKnown RBP8.23□□□□□ -1.09
MRPL55-228ENST00000476267 SULT1A2P50226 295 aa8.23□□□□□ -1.09
MRPL55-228ENST00000476267 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
MRPL55-228ENST00000476267 K7EN84 100 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 BCL2P10415 239 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
MRPL55-228ENST00000476267 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
MRPL55-228ENST00000476267 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 CHCHD10Q8WYQ3 142 aaPredicted RBP8.22□□□□□ -1.09
MRPL55-228ENST00000476267 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 MED9Q9NWA0 146 aa8.22□□□□□ -1.09
MRPL55-228ENST00000476267 NCR2O95944 276 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 FOXI1Q12951 378 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 CFAP161Q6P656 301 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
MRPL55-228ENST00000476267 DPH3Q96FX2 82 aa8.21□□□□□ -1.1
MRPL55-228ENST00000476267 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
MRPL55-228ENST00000476267 A0A096LNI7 61 aa8.2□□□□□ -1.1
MRPL55-228ENST00000476267 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
MRPL55-228ENST00000476267 TEX46H3BTG2 121 aa8.2□□□□□ -1.1
MRPL55-228ENST00000476267 H7C423 109 aa8.2□□□□□ -1.1
MRPL55-228ENST00000476267 FOXA3P55318 350 aaPredicted RBP8.2□□□□□ -1.1
MRPL55-228ENST00000476267 TWIST1Q15672 202 aa8.2□□□□□ -1.1
MRPL55-228ENST00000476267 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
MRPL55-228ENST00000476267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
MRPL55-228ENST00000476267 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
MRPL55-228ENST00000476267 FAM231BA6NCW3 169 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 FGF6P10767 208 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 MAJINQ3KP22 176 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 EIF5AL1Q6IS14 154 aaKnown RBP8.19□□□□□ -1.1
MRPL55-228ENST00000476267 STPG4Q8N801 248 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
MRPL55-228ENST00000476267 APCSP02743 223 aa8.18□□□□□ -1.1
MRPL55-228ENST00000476267 ODF1Q14990 250 aa8.18□□□□□ -1.1
MRPL55-228ENST00000476267 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
MRPL55-228ENST00000476267 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
MRPL55-228ENST00000476267 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
MRPL55-228ENST00000476267 ESDP10768 282 aa8.17□□□□□ -1.1
MRPL55-228ENST00000476267 ZNF25P17030 456 aaPredicted RBP8.17□□□□□ -1.1
MRPL55-228ENST00000476267 AMMECR1LQ6DCA0 310 aa8.17□□□□□ -1.1
MRPL55-228ENST00000476267 GAS8-AS1O95177 125 aa8.16□□□□□ -1.1
MRPL55-228ENST00000476267 TAGLN2P37802 199 aaKnown RBP8.16□□□□□ -1.1
MRPL55-228ENST00000476267 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
MRPL55-228ENST00000476267 RNASEKQ6P5S7 137 aaKnown RBP8.16□□□□□ -1.1
MRPL55-228ENST00000476267 TEX261Q6UWH6 196 aa8.16□□□□□ -1.1
MRPL55-228ENST00000476267 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 I3L3M4 83 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 TSHBP01222 138 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 SRSF9Q13242 221 aaKnown RBP eCLIP8.15□□□□□ -1.1
MRPL55-228ENST00000476267 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 LYPD6BQ8NI32 183 aa8.15□□□□□ -1.1
MRPL55-228ENST00000476267 CCL25O15444 150 aa8.14□□□□□ -1.11
MRPL55-228ENST00000476267 XCL1P47992 114 aa8.14□□□□□ -1.11
MRPL55-228ENST00000476267 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
MRPL55-228ENST00000476267 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
MRPL55-228ENST00000476267 LINC00526Q96FQ7 95 aa8.14□□□□□ -1.11
MRPL55-228ENST00000476267 IGHV1-58A0A0C4DH39 117 aa8.13□□□□□ -1.11
MRPL55-228ENST00000476267 MRPL52Q86TS9 123 aaKnown RBP8.13□□□□□ -1.11
MRPL55-228ENST00000476267 TCTE3Q8IZS6 198 aa8.13□□□□□ -1.11
MRPL55-228ENST00000476267 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
MRPL55-228ENST00000476267 LINC00474Q9P2X8 69 aa8.13□□□□□ -1.11
MRPL55-228ENST00000476267 TMEM250H0YL14 139 aa8.12□□□□□ -1.11
MRPL55-228ENST00000476267 POLR2KP53803 58 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms