RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 TRBV7-3A0A075B6L6 115 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 SPXQ9BT56 116 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 WFDC10AQ9H1F0 79 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 IGHV3-53P01767 116 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
CCDC66-216ENST00000476142 C1orf158Q8N1D5 194 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
CCDC66-216ENST00000476142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-216ENST00000476142 IGKV2-29A2NJV5 120 aaPredicted RBP6.47□□□□□ -1.37
CCDC66-216ENST00000476142 RHODO00212 210 aa6.47□□□□□ -1.37
CCDC66-216ENST00000476142 RPL35AP18077 110 aaKnown RBP6.47□□□□□ -1.37
CCDC66-216ENST00000476142 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
CCDC66-216ENST00000476142 FASNP49327 2511 aaKnown RBP6.47□□□□□ -1.37
CCDC66-216ENST00000476142 LINC00467Q9BRT7 94 aa6.46□□□□□ -1.37
CCDC66-216ENST00000476142 EDA2RQ9HAV5 297 aa6.46□□□□□ -1.37
CCDC66-216ENST00000476142 NOTCH3Q9UM47 2321 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 J3QQQ9 107 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 RS1O15537 224 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 PIK3CD-AS1Q5SR53 167 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 ZNF479Q96JC4 524 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 NIPBLQ6KC79 2804 aaeCLIP6.46□□□□□ -1.38
CCDC66-216ENST00000476142 ANK3Q12955 4377 aaKnown RBP6.46□□□□□ -1.38
CCDC66-216ENST00000476142 IGLL5B9A064 214 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 ZNF22P17026 224 aaPredicted RBP6.46□□□□□ -1.38
CCDC66-216ENST00000476142 COTL1Q14019 142 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 BEAN1Q3B7T3 259 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 NFE4Q86UQ8 179 aa6.46□□□□□ -1.38
CCDC66-216ENST00000476142 JMJD1CQ15652 2540 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 HILS1P60008 231 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 OCIAD2Q56VL3 154 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 Q6ZTI0 123 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 PTH2Q96A98 100 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 A0A0J9YY99 117 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 CLUHP3Q96NS8 147 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
CCDC66-216ENST00000476142 NOP10Q9NPE3 64 aaKnown RBP6.45□□□□□ -1.38
CCDC66-216ENST00000476142 A6NJY4 79 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 APOMO95445 188 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 HECTD1Q9ULT8 2610 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 NOTCH2Q04721 2471 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 LEPROTO15243 131 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 PYGO1Q9Y3Y4 419 aa6.44□□□□□ -1.38
CCDC66-216ENST00000476142 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 Q6ZUT4 128 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 TMEM263Q8WUH6 116 aaKnown RBP6.43□□□□□ -1.38
CCDC66-216ENST00000476142 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 NACAE9PAV3 2078 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 ADARB2-AS1A8MUL3 147 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 IGLV1-51P01701 117 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 RBX1P62877 108 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 FAM104AQ969W3 186 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 CBY1Q9Y3M2 126 aa6.43□□□□□ -1.38
CCDC66-216ENST00000476142 SETXQ7Z333 2677 aaKnown RBP6.43□□□□□ -1.38
CCDC66-216ENST00000476142 PF4P02776 101 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 AMELXQ99217 191 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 TIMM21Q9BVV7 248 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 SPANXA1Q9NS26 97 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 LY6G6DO95868 133 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
CCDC66-216ENST00000476142 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
CCDC66-216ENST00000476142 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
CCDC66-216ENST00000476142 TRGV2A0A075B6R0 118 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE12JA6NER3 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 K7EQD1 137 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE7O76087 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE4Q13068 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE5Q13069 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GAGE13Q4V321 117 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 SLC25A29Q8N8R3 303 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 VPS25Q9BRG1 176 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 H3BMG7 143 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 NDUFA7O95182 113 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 RPL36AP83881 106 aaKnown RBP6.41□□□□□ -1.38
CCDC66-216ENST00000476142 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
CCDC66-216ENST00000476142 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GEMIN7Q9H840 131 aaKnown RBP6.41□□□□□ -1.38
CCDC66-216ENST00000476142 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
CCDC66-216ENST00000476142 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
CCDC66-216ENST00000476142 K7ERU9 68 aa6.4□□□□□ -1.38
CCDC66-216ENST00000476142 IGHV3-30P01768 117 aa6.4□□□□□ -1.38
CCDC66-216ENST00000476142 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.38
CCDC66-216ENST00000476142 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.38
CCDC66-216ENST00000476142 KRTAP10-3P60369 221 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms