RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-223ENST00000476135 CXCL1P09341 107 aa4.53□□□□□ -1.68
HDAC9-223ENST00000476135 SFTA3P0C7M3 94 aa4.53□□□□□ -1.68
HDAC9-223ENST00000476135 PEA15Q15121 130 aa4.53□□□□□ -1.68
HDAC9-223ENST00000476135 PARLQ9H300 379 aa4.53□□□□□ -1.68
HDAC9-223ENST00000476135 RAB19A4D1S5 217 aa4.52□□□□□ -1.69
HDAC9-223ENST00000476135 KRBOX1C9JBD0 128 aa4.52□□□□□ -1.69
HDAC9-223ENST00000476135 GNRH2O43555 120 aa4.52□□□□□ -1.69
HDAC9-223ENST00000476135 RPS20P60866 119 aaKnown RBP4.52□□□□□ -1.69
HDAC9-223ENST00000476135 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
HDAC9-223ENST00000476135 SMIM7Q9BQ49 75 aa4.52□□□□□ -1.69
HDAC9-223ENST00000476135 SMDT1Q9H4I9 107 aa4.52□□□□□ -1.69
HDAC9-223ENST00000476135 TRBV20OR9-2A0A075B6H5 130 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 IGKV2D-24A0A075B6R9 120 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 TMSB15BA0A087X1C1 80 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 IGKV3D-20A0A0C4DH25 116 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 H3BVH4 76 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 P01737 135 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 CRIP1P50238 77 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 ZNF876PQ49A33 203 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 FAM74A3Q4VXF1 159 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 DNLZQ5SXM8 178 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 DAZ4Q86SG3 579 aaKnown RBP4.51□□□□□ -1.69
HDAC9-223ENST00000476135 C9orf163Q8N9P6 203 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 RASL10AQ92737 203 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 PTH2Q96A98 100 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 TMEM18Q96B42 140 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 RNF185Q96GF1 192 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 DAZ3Q9NR90 486 aaKnown RBP4.51□□□□□ -1.69
HDAC9-223ENST00000476135 IL36BQ9NZH7 164 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
HDAC9-223ENST00000476135 GRIFINA4D1Z8 144 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 ZNF727A8MUV8 499 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 A8MWV9 139 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 RHODO00212 210 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 PHOX2AO14813 284 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 CIDEAO60543 219 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
HDAC9-223ENST00000476135 ARMS2P0C7Q2 107 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 RNASE3P12724 160 aaKnown RBP4.5□□□□□ -1.69
HDAC9-223ENST00000476135 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
HDAC9-223ENST00000476135 CLLU1Q5K131 121 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 ZFP82Q8N141 532 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 OR4C5Q8NGB2 326 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 OR2D3Q8NGH3 330 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 C7orf33Q8WU49 177 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 GTSF1LQ9H1H1 148 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 PHLDA3Q9Y5J5 127 aa4.5□□□□□ -1.69
HDAC9-223ENST00000476135 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 M0R381 172 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 OR5AL1P0C617 328 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
HDAC9-223ENST00000476135 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
HDAC9-223ENST00000476135 SPANXN1Q5VSR9 72 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 FAM231DQ6ZW35 169 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 FER1L6-AS1Q8NA97 138 aa4.49□□□□□ -1.69
HDAC9-223ENST00000476135 RPP21Q9H633 154 aaKnown RBP4.49□□□□□ -1.69
HDAC9-223ENST00000476135 A0A087WYN8 130 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 K7EN84 100 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 SNAI2O43623 268 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 GATCO43716 136 aaKnown RBP4.48□□□□□ -1.69
HDAC9-223ENST00000476135 CACNG7P62955 275 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
HDAC9-223ENST00000476135 IFITM2Q01629 132 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 TMEM241Q24JQ0 296 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 CFAP126Q5VTH2 177 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 ATRAIDQ6UW56 229 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 ZFP2Q6ZN57 461 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 LINC01551Q86U37 167 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 C15orf54Q8N8G6 183 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 AP1S3Q96PC3 154 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
HDAC9-223ENST00000476135 NAT8Q9UHE5 227 aa4.48□□□□□ -1.69
HDAC9-223ENST00000476135 A8MWL6 223 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 F2Z2F3 143 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 RHOHQ15669 191 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 ADIRFQ15847 76 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 UQCC3Q6UW78 93 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 OR10AG1Q8NH19 301 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 BORCS7Q96B45 105 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 DPH3Q96FX2 82 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 DNAJC30Q96LL9 226 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 PRADC1Q9BSG0 188 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 PLAC8Q9NZF1 115 aa4.47□□□□□ -1.69
HDAC9-223ENST00000476135 TRBV6-4A0A1B0GX49 114 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 C9JQL5 133 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 PRSS1P07477 247 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 TRGC1P0CF51 173 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 IGLC6P0CF74 106 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 CTRLP40313 264 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 RPL23P62829 140 aaKnown RBP4.46□□□□□ -1.7
HDAC9-223ENST00000476135 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
HDAC9-223ENST00000476135 FAM74A4Q5TZK3 123 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 SMIM15Q7Z3B0 74 aa4.46□□□□□ -1.7
HDAC9-223ENST00000476135 SLC25A29Q8N8R3 303 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms