RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 TRAV8-2A0A0B4J237 113 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 A0A0J9YWU9 116 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 TEX48A0A1B0GUV7 120 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 FBLL1A6NHQ2 334 aaKnown RBP3.06□□□□□ -1.92
VPS13D-206ENST00000476045 VPREB1P12018 145 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 S100A7P31151 101 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 LEPP41159 167 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 NMUP48645 174 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 LGALS9BQ3B8N2 356 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 LGALS9CQ6DKI2 356 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-206ENST00000476045 Q6ZQT7 251 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 COX8CQ7Z4L0 72 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 RHPN1-AS1Q9BWJ2 59 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 C1QTNF4Q9BXJ3 329 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 AGPAT4-IT1Q9H0P7 198 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 CSTL1Q9H114 145 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 MAP6D1Q9H9H5 199 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 CBY1Q9Y3M2 126 aa3.06□□□□□ -1.92
VPS13D-206ENST00000476045 TRAV8-6A0A0B4J262 113 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 IGKV3D-20A0A0C4DH25 116 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 BUB3O43684 328 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 PRSS1P07477 247 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 FGF6P10767 208 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 MIFP14174 115 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 FCER1GP30273 86 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 DEFB1P60022 68 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 SNRPD3P62318 126 aaKnown RBP3.05□□□□□ -1.92
VPS13D-206ENST00000476045 TMEM78Q5T7P6 136 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 PCP2Q8IVA1 136 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 STHQ8IWL8 128 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 ARL6IP6Q8N6S5 226 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 RAB37Q96AX2 223 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 SLC50A1Q9BRV3 221 aa3.05□□□□□ -1.92
VPS13D-206ENST00000476045 IGKV3-7A0A075B6H7 116 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 IGKV2D-30A0A075B6S6 120 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 TRAV26-2A0A0B4J265 109 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 IGLV5-39A0A0G2JS06 123 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 C7orf71A4D174 169 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 RBAKDNA6NC62 111 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 H3BVH4 76 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 K7EP13 123 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 K7EQG2 157 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 LY6G6CO95867 125 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 PPBPP02775 128 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 MGPP08493 103 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 RPL35AP18077 110 aaKnown RBP3.04□□□□□ -1.92
VPS13D-206ENST00000476045 HSD52Q0P140 79 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 PIK3CD-AS1Q5SR53 167 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 PRR9Q5T870 116 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 SPANXN1Q5VSR9 72 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 SMIM15Q7Z3B0 74 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 BOD1L2Q8IYS8 172 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 Q8N8P6 123 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 C11orf45Q8TAV5 145 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 PHLDA1Q8WV24 401 aaPredicted RBP3.04□□□□□ -1.92
VPS13D-206ENST00000476045 AP1S3Q96PC3 154 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 TTTY13Q9BZ97 58 aa3.04□□□□□ -1.92
VPS13D-206ENST00000476045 NXT2Q9NPJ8 142 aaKnown RBP3.04□□□□□ -1.92
VPS13D-206ENST00000476045 HERC2O95714 4834 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 IGKV2D-26A0A0A0MRZ7 120 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 TRAV10A0A0B4J240 114 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 A6NDN8 102 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 F6UB75 175 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 H3BRM9 83 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 H3BUT2 72 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 M0R381 172 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 ATP5LO75964 103 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 DPM2O94777 84 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 IGKCP01834 107 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 SMIM17P0DL12 118 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 RNASE4P34096 147 aaKnown RBP3.03□□□□□ -1.92
VPS13D-206ENST00000476045 DEFB131AP59861 70 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
VPS13D-206ENST00000476045 RBX1P62877 108 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 SEC11AP67812 179 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 TRPT1Q86TN4 253 aaKnown RBP3.03□□□□□ -1.92
VPS13D-206ENST00000476045 APRG1Q8IVJ8 170 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 Q8NAQ8 132 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 OR10J6PQ8NGY7 276 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 DCANP1Q8TF63 244 aa3.03□□□□□ -1.92
VPS13D-206ENST00000476045 MRPL53Q96EL3 112 aaKnown RBP3.03□□□□□ -1.92
VPS13D-206ENST00000476045 MUC4Q99102 2169 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 IGLV2-18A0A075B6J9 118 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 LINC01546A6NGU7 62 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 SMIM9A6NGZ8 99 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 K7EMI3 77 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 K7EP34 96 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 K7ERJ3 54 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 SIVA1O15304 175 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 GNRH2O43555 120 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 ZNF688P0C7X2 276 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 HLA-DRB4P13762 266 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 S100A4P26447 101 aaKnown RBP3.02□□□□□ -1.93
VPS13D-206ENST00000476045 ASIPP42127 132 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 CDKN1BP46527 198 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 LAGE3Q14657 143 aa3.02□□□□□ -1.93
VPS13D-206ENST00000476045 OCIAD2Q56VL3 154 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms