RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 HIST2H2BDQ6DRA6 164 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 C9orf85Q96MD7 179 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 TIMM21Q9BVV7 248 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
SEMA4D-217ENST00000475255 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
SEMA4D-217ENST00000475255 H3BMM0 161 aa10.09□□□□□ -0.79
SEMA4D-217ENST00000475255 M0R2P5 195 aa10.09□□□□□ -0.79
SEMA4D-217ENST00000475255 UBE2WQ96B02 151 aa10.09□□□□□ -0.79
SEMA4D-217ENST00000475255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE12JA6NER3 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 I3L3M4 83 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE7O76087 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 GAGE4Q13068 117 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 KLRB1Q12918 225 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 PTPN13Q12923 2485 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
SEMA4D-217ENST00000475255 A0A0J9YX75 114 aa10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 LITAFQ99732 161 aa10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 CHCHD5Q9BSY4 110 aa10.07□□□□□ -0.8
SEMA4D-217ENST00000475255 AVPP01185 164 aa10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 Q6ZSN1 163 aa10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 H7C423 109 aa10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 RHOHQ15669 191 aa10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
SEMA4D-217ENST00000475255 MXRA5Q9NR99 2828 aa10.05□□□□□ -0.8
SEMA4D-217ENST00000475255 FAM208BQ5VWN6 2430 aa10.05□□□□□ -0.8
SEMA4D-217ENST00000475255 A6NDX4 124 aa10.05□□□□□ -0.8
SEMA4D-217ENST00000475255 CACNA1AO00555 2505 aa10.05□□□□□ -0.8
SEMA4D-217ENST00000475255 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
SEMA4D-217ENST00000475255 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 MYO18BQ8IUG5 2567 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 ACACBO00763 2458 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 IGLV1-40P01703 118 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 COX6CP09669 75 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 NBL1P41271 181 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 HERV-K104P63124 156 aa10.04□□□□□ -0.8
SEMA4D-217ENST00000475255 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
SEMA4D-217ENST00000475255 FBN2P35556 2912 aa10.03□□□□□ -0.8
SEMA4D-217ENST00000475255 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
SEMA4D-217ENST00000475255 MEIG1Q5JSS6 88 aa10.03□□□□□ -0.8
SEMA4D-217ENST00000475255 CFAP46Q8IYW2 2715 aa10.03□□□□□ -0.8
SEMA4D-217ENST00000475255 IGHV4-30-2A0A087WSY4 118 aa10.02□□□□□ -0.81
SEMA4D-217ENST00000475255 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
SEMA4D-217ENST00000475255 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
SEMA4D-217ENST00000475255 MAPK1IP1LQ8NDC0 245 aa10.02□□□□□ -0.81
SEMA4D-217ENST00000475255 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 DEFB136Q30KP8 78 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 K7EQG2 157 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 NRGNQ92686 78 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 EPG5Q9HCE0 2579 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 NDUFA7O95182 113 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
SEMA4D-217ENST00000475255 CHD6Q8TD26 2715 aa10□□□□□ -0.81
SEMA4D-217ENST00000475255 MRPS36P82909 103 aaKnown RBP10□□□□□ -0.81
SEMA4D-217ENST00000475255 VSIG2Q96IQ7 327 aa10□□□□□ -0.81
SEMA4D-217ENST00000475255 TRGV11A0A075B6L2 103 aa9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 DEFB131AP59861 70 aa9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 ABCA12Q86UK0 2595 aa9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 RS1O15537 224 aa9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 MIAQ16674 131 aa9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 NIPBLQ6KC79 2804 aaeCLIP9.99□□□□□ -0.81
SEMA4D-217ENST00000475255 H3BUA1 57 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 C18orf65Q6ZTR6 163 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 K7EMT4 169 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 CFHR3Q02985 330 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 NAV2Q8IVL1 2488 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 BRI3O95415 125 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 GNLYP22749 145 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 PSMB8P28062 276 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 ATP5J2P56134 94 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
SEMA4D-217ENST00000475255 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
SEMA4D-217ENST00000475255 PKD1L2Q7Z442 2459 aa9.97□□□□□ -0.81
SEMA4D-217ENST00000475255 COX6A2Q02221 97 aa9.97□□□□□ -0.81
SEMA4D-217ENST00000475255 DEFB112Q30KQ8 113 aa9.97□□□□□ -0.81
SEMA4D-217ENST00000475255 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.81
SEMA4D-217ENST00000475255 ZFYVE26Q68DK2 2539 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms