RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TIRAPP58753 221 aa6.89□□□□□ -1.31
COL8A1-206ENST00000474648 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.89□□□□□ -1.31
COL8A1-206ENST00000474648 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
COL8A1-206ENST00000474648 TSHBP01222 138 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 PMCHP20382 165 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 IQCJQ1A5X6 159 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 Q8N8P6 123 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 C18orf32Q8TCD1 76 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 SMIM2Q9BVW6 85 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 MAP1LC3AQ9H492 121 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 LINC00588Q9Y4M8 146 aa6.88□□□□□ -1.31
COL8A1-206ENST00000474648 IFI27P40305 119 aaPredicted RBP6.87□□□□□ -1.31
COL8A1-206ENST00000474648 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
COL8A1-206ENST00000474648 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
COL8A1-206ENST00000474648 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 TCAPO15273 167 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 ESDP10768 282 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 Q0VG73 95 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 COTL1Q14019 142 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 LELP1Q5T871 98 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 NIT1Q86X76 327 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 CHCHD7Q9BUK0 85 aa6.86□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 TMEM97Q5BJF2 176 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
COL8A1-206ENST00000474648 PRSS3P2Q8NHM4 247 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 NXT2Q9NPJ8 142 aaKnown RBP6.85□□□□□ -1.31
COL8A1-206ENST00000474648 MRPS16Q9Y3D3 137 aaKnown RBP6.85□□□□□ -1.31
COL8A1-206ENST00000474648 LYSTQ99698 3801 aa6.85□□□□□ -1.31
COL8A1-206ENST00000474648 IGHV1-24A0A0C4DH33 117 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 C1orf196B1AJZ1 125 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 LINC00614P0C842 121 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 CCL18P55774 89 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 KIR2DL4Q99706 377 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
COL8A1-206ENST00000474648 FCER1GP30273 86 aa6.83□□□□□ -1.32
COL8A1-206ENST00000474648 AMTP48728 403 aa6.83□□□□□ -1.32
COL8A1-206ENST00000474648 LINC00310P59036 64 aa6.83□□□□□ -1.32
COL8A1-206ENST00000474648 SACSQ9NZJ4 4579 aa6.83□□□□□ -1.32
COL8A1-206ENST00000474648 TRBV25-1A0A075B6N4 114 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 TRAV8-6A0A0B4J262 113 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 K7EMI3 77 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 NUPR1O60356 82 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 GAGE6Q13070 117 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 LAGE3Q14657 143 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 LGALS9CQ6DKI2 356 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 FA2HQ7L5A8 372 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 C20orf203Q8NBC4 194 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
COL8A1-206ENST00000474648 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-206ENST00000474648 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-206ENST00000474648 RAB5BP61020 215 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 BAGE3Q86Y29 109 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 CHCHD5Q9BSY4 110 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 Q9H8V8 135 aa6.81□□□□□ -1.32
COL8A1-206ENST00000474648 A0A096LNJ9 63 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 H7C423 109 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 SERF1AO75920 110 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 RPL39P62891 51 aaKnown RBP6.8□□□□□ -1.32
COL8A1-206ENST00000474648 COA6Q5JTJ3 125 aaKnown RBP6.8□□□□□ -1.32
COL8A1-206ENST00000474648 RNASEKQ6P5S7 137 aaKnown RBP6.8□□□□□ -1.32
COL8A1-206ENST00000474648 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
COL8A1-206ENST00000474648 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
COL8A1-206ENST00000474648 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 SIVA1O15304 175 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 DNAH10OSP0CZ25 163 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 FGF6P10767 208 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 NDUFA6P56556 154 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 RBX1P62877 108 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 PMCHL1Q16048 86 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
COL8A1-206ENST00000474648 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
COL8A1-206ENST00000474648 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 RYR2Q92736 4967 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 A0A1B0GUV1 79 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 MPV17L2Q567V2 206 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 LINC01556Q5JQF7 62 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 C2orf66Q6UXQ4 117 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 Q8N976 141 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 TOMM6Q96B49 74 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 TIMM21Q9BVV7 248 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
COL8A1-206ENST00000474648 KMT2CQ8NEZ4 4911 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms