RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 LINC00310P59036 64 aa7.28□□□□□ -1.24
COL12A1-206ENST00000474564 S100A12P80511 92 aa7.28□□□□□ -1.24
COL12A1-206ENST00000474564 NEGR1Q7Z3B1 354 aa7.28□□□□□ -1.24
COL12A1-206ENST00000474564 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 PRSS47A8MTI9 375 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 IGLL5B9A064 214 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 C12orf57Q99622 126 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 TMEM70Q9BUB7 260 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 NOTCH1P46531 2555 aa7.27□□□□□ -1.25
COL12A1-206ENST00000474564 TRBV27A0A0K0K1C4 114 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 UBE2L6O14933 153 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 P0DMU3 169 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 FAM231AP0DMU4 169 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 FAM231CP0DMU5 169 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 POLR2KP53803 58 aaKnown RBP7.26□□□□□ -1.25
COL12A1-206ENST00000474564 UBE2D3P61077 147 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 PKIAP61925 76 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 UBE2D2P62837 147 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 CEMP1Q6PRD7 247 aaPredicted RBP7.26□□□□□ -1.25
COL12A1-206ENST00000474564 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 WWC2-AS2Q96NR7 200 aa7.26□□□□□ -1.25
COL12A1-206ENST00000474564 ATP5LO75964 103 aa7.25□□□□□ -1.25
COL12A1-206ENST00000474564 CCL18P55774 89 aa7.25□□□□□ -1.25
COL12A1-206ENST00000474564 VSIG2Q96IQ7 327 aa7.25□□□□□ -1.25
COL12A1-206ENST00000474564 GTSF1LQ9H1H1 148 aa7.25□□□□□ -1.25
COL12A1-206ENST00000474564 TRBV25-1A0A075B6N4 114 aa7.24□□□□□ -1.25
COL12A1-206ENST00000474564 TRAV8-6A0A0B4J262 113 aa7.24□□□□□ -1.25
COL12A1-206ENST00000474564 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
COL12A1-206ENST00000474564 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
COL12A1-206ENST00000474564 Q6ZN92 141 aa7.24□□□□□ -1.25
COL12A1-206ENST00000474564 CYSLTR1Q9Y271 337 aa7.24□□□□□ -1.25
COL12A1-206ENST00000474564 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 LOC100131303A0A0U1RQF7 123 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 PRSS1P07477 247 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 DGAT2L7PQ6IED9 249 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 DEFB104AQ8WTQ1 72 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 IFI27L1Q96BM0 104 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 SCGB3A1Q96QR1 104 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
COL12A1-206ENST00000474564 IGLV2-18A0A075B6J9 118 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 A0A096LPF7 62 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 TRBV6-8A0A0A6YYG3 113 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 HSBP1L1C9JCN9 74 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.22□□□□□ -1.25
COL12A1-206ENST00000474564 H7C423 109 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 TIRAPP58753 221 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 C2orf66Q6UXQ4 117 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 LINC00518Q8N0U6 118 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 MUC7Q8TAX7 377 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 CHCHD5Q9BSY4 110 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 NBEAL1Q6ZS30 2694 aa7.22□□□□□ -1.25
COL12A1-206ENST00000474564 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 TMEM262E9PQX1 116 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 UBE2DNLQ8IWF7 75 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 TMEM101Q96IK0 257 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 VAMP8Q9BV40 100 aa7.21□□□□□ -1.26
COL12A1-206ENST00000474564 TSHBP01222 138 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 LELP1Q5T871 98 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 LYPD5Q6UWN5 251 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 Q9UF83 564 aa7.2□□□□□ -1.26
COL12A1-206ENST00000474564 A0A087WX48 190 aa7.19□□□□□ -1.26
COL12A1-206ENST00000474564 C3orf84H3BNL1 204 aa7.19□□□□□ -1.26
COL12A1-206ENST00000474564 LINC00694P0DN24 101 aa7.19□□□□□ -1.26
COL12A1-206ENST00000474564 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 A0A096LNJ9 63 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 PCP4L1A6NKN8 68 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 TSTD3H0UI37 97 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 ZNF25P17030 456 aaPredicted RBP7.18□□□□□ -1.26
COL12A1-206ENST00000474564 ZFAND6Q6FIF0 208 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 SPANXA1Q9NS26 97 aa7.18□□□□□ -1.26
COL12A1-206ENST00000474564 NBEAL2Q6ZNJ1 2754 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 NPSP0C0P6 89 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 ERASQ7Z444 233 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 ATOH7Q8N100 152 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 OR5A1Q8NGJ0 315 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
COL12A1-206ENST00000474564 RPL39P62891 51 aaKnown RBP7.16□□□□□ -1.26
COL12A1-206ENST00000474564 GAGE6Q13070 117 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 ESRGQ1W209 222 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 LGALS9CQ6DKI2 356 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
COL12A1-206ENST00000474564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.15□□□□□ -1.26
COL12A1-206ENST00000474564 IGKV2-29A2NJV5 120 aaPredicted RBP7.15□□□□□ -1.26
COL12A1-206ENST00000474564 FGF6P10767 208 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 SPATA45Q537H7 98 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 NTM-AS1Q6ZSK4 140 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
COL12A1-206ENST00000474564 C2orf88Q9BSF0 95 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms