RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
SMIM11A-204ENST00000474455 C19orf73Q9NVV2 129 aa15.2■□□□□ 0.02
SMIM11A-204ENST00000474455 RNASE4P34096 147 aaKnown RBP15.19■□□□□ 0.02
SMIM11A-204ENST00000474455 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
SMIM11A-204ENST00000474455 RNASE3P12724 160 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 AMTNQ6UX39 209 aa15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 SCGB1D4Q6XE38 83 aa15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 MRPL16Q9NX20 251 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 KIF25-AS1Q9Y6Z4 181 aa15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 J3KRW8 73 aa15.18■□□□□ 0.02
SMIM11A-204ENST00000474455 PMVKQ15126 192 aa15.17■□□□□ 0.02
SMIM11A-204ENST00000474455 VCYO14598 125 aa15.16■□□□□ 0.02
SMIM11A-204ENST00000474455 SRSF9Q13242 221 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMIM11A-204ENST00000474455 TIMM17AQ99595 171 aa15.16■□□□□ 0.02
SMIM11A-204ENST00000474455 CFAP126Q5VTH2 177 aa15.16■□□□□ 0.02
SMIM11A-204ENST00000474455 C1QTNF4Q9BXJ3 329 aa15.16■□□□□ 0.02
SMIM11A-204ENST00000474455 RBMY1BA6NDE4 496 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 RBMY1EA6NEQ0 496 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 IGIPA6NJ69 53 aa15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 WIPF1O43516 503 aa15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 CRYGDP07320 174 aa15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 RBMY1DP0C7P1 496 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 POLR2KP53803 58 aaKnown RBP15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 LINC00315P59091 139 aa15.15■□□□□ 0.02
SMIM11A-204ENST00000474455 IGLV4-69A0A075B6H9 119 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 H3BMM0 161 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 GNRH2O43555 120 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 DUSP14O95147 198 aaKnown RBP15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 APOMO95445 188 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 KRTAP10-11P60412 298 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 UBE2D3P61077 147 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 UBE2D2P62837 147 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 SMAGPQ0VAQ4 97 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 PLEKHB2Q96CS7 222 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 C11orf86A6NJI1 115 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 KLLNB2CW77 178 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 ZFP2Q6ZN57 461 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 VCX2Q9H322 139 aa15.14■□□□□ 0.01
SMIM11A-204ENST00000474455 NOTCH1P46531 2555 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 TRBV6-5A0A0K0K1A5 114 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 A0A1B0GV72 72 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 TSPAN13O95857 204 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 KIR2DL4Q99706 377 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 TP53TG1Q9Y2A0 90 aa15.13■□□□□ 0.01
SMIM11A-204ENST00000474455 A0A0J9YY99 117 aa15.12■□□□□ 0.01
SMIM11A-204ENST00000474455 TSHBP01222 138 aa15.12■□□□□ 0.01
SMIM11A-204ENST00000474455 FOXI1Q12951 378 aa15.12■□□□□ 0.01
SMIM11A-204ENST00000474455 TRBV20-1A0A075B6N2 111 aa15.12■□□□□ 0.01
SMIM11A-204ENST00000474455 TRAV12-2A0A075B6T6 113 aa15.11■□□□□ 0.01
SMIM11A-204ENST00000474455 SPRY2O43597 315 aa15.11■□□□□ 0.01
SMIM11A-204ENST00000474455 SPINK13Q1W4C9 94 aa15.11■□□□□ 0.01
SMIM11A-204ENST00000474455 FAM159AQ6UWV7 190 aa15.11■□□□□ 0.01
SMIM11A-204ENST00000474455 Q8N1Y9 231 aa15.11■□□□□ 0.01
SMIM11A-204ENST00000474455 MGAM2Q2M2H8 2515 aa15.1■□□□□ 0.01
SMIM11A-204ENST00000474455 SUMO4Q6EEV6 95 aa15.1■□□□□ 0.01
SMIM11A-204ENST00000474455 SLC25A29Q8N8R3 303 aa15.1■□□□□ 0.01
SMIM11A-204ENST00000474455 NBEAL1Q6ZS30 2694 aa15.09■□□□□ 0.01
SMIM11A-204ENST00000474455 TRBV27A0A0K0K1C4 114 aa15.09■□□□□ 0.01
SMIM11A-204ENST00000474455 STHQ8IWL8 128 aa15.09■□□□□ 0.01
SMIM11A-204ENST00000474455 ODF3Q96PU9 254 aa15.09■□□□□ 0.01
SMIM11A-204ENST00000474455 FAM110AQ9BQ89 295 aa15.09■□□□□ 0.01
SMIM11A-204ENST00000474455 PSMB2P49721 201 aa15.08■□□□□ 0.01
SMIM11A-204ENST00000474455 SMCPP49901 116 aaPredicted RBP15.08■□□□□ 0.01
SMIM11A-204ENST00000474455 ZNF876PQ49A33 203 aa15.08■□□□□ 0.01
SMIM11A-204ENST00000474455 A8MTW9 85 aa15.08■□□□□ 0
SMIM11A-204ENST00000474455 RHOHQ15669 191 aa15.08■□□□□ 0
SMIM11A-204ENST00000474455 TRPT1Q86TN4 253 aaKnown RBP15.08■□□□□ 0
SMIM11A-204ENST00000474455 SBSPONQ8IVN8 264 aa15.08■□□□□ 0
SMIM11A-204ENST00000474455 LOC107984156A0A0G2JMH3 177 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 IGHV3-30P01768 117 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 IGHV3-30-5P0DP03 117 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 RPL35AP18077 110 aaKnown RBP15.07■□□□□ 0
SMIM11A-204ENST00000474455 NFE4Q86UQ8 179 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 ARL17AQ8IVW1 177 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 PPDPFLQ8WWR9 84 aa15.07■□□□□ 0
SMIM11A-204ENST00000474455 CMC4P56277 68 aaPredicted RBP15.06■□□□□ 0
SMIM11A-204ENST00000474455 EGFEM1PQ0D2K5 195 aa15.06■□□□□ 0
SMIM11A-204ENST00000474455 MTURNQ8N3F0 131 aa15.06■□□□□ 0
SMIM11A-204ENST00000474455 SYT8Q8NBV8 401 aa15.06■□□□□ 0
SMIM11A-204ENST00000474455 SDHAF1A6NFY7 115 aa15.05■□□□□ -0
SMIM11A-204ENST00000474455 TRAV12-3A0A0B4J271 114 aa15.04■□□□□ -0
SMIM11A-204ENST00000474455 M0QXV9 152 aa15.04■□□□□ -0
SMIM11A-204ENST00000474455 TEN1Q86WV5 123 aa15.04■□□□□ -0
SMIM11A-204ENST00000474455 C10orf126Q8N4M7 172 aa15.04■□□□□ -0
SMIM11A-204ENST00000474455 C9orf85Q96MD7 179 aa15.04■□□□□ -0
SMIM11A-204ENST00000474455 RBMY1A1P0DJD3 496 aaKnown RBP15.03■□□□□ -0
SMIM11A-204ENST00000474455 RBMY1CP0DJD4 496 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 RBMY1FQ15415 496 aaKnown RBP15.03■□□□□ -0
SMIM11A-204ENST00000474455 F5H697 171 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 J3QQQ9 107 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 CFC1BP0CG36 223 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 CFC1P0CG37 223 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 LGALS3P17931 250 aaKnown RBP15.03■□□□□ -0
SMIM11A-204ENST00000474455 TMEM170BQ5T4T1 132 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 PRO1854Q9UHT4 67 aa15.03■□□□□ -0
SMIM11A-204ENST00000474455 LEPROTO15243 131 aa15.02■□□□□ -0
SMIM11A-204ENST00000474455 PRB2P02812 416 aaPredicted RBP15.02■□□□□ -0
SMIM11A-204ENST00000474455 GIG44P09565 113 aaPredicted RBP15.02■□□□□ -0
SMIM11A-204ENST00000474455 AMELXQ99217 191 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms