RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
VPS50-211ENST00000474412 MANBALQ9NQG1 85 aa4.57□□□□□ -1.68
VPS50-211ENST00000474412 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.56□□□□□ -1.68
VPS50-211ENST00000474412 C19orf71A6NCJ1 209 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 SMR3BP02814 79 aaPredicted RBP4.56□□□□□ -1.68
VPS50-211ENST00000474412 CXCL1P09341 107 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 IGLC6P0CF74 106 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 LAGE3Q14657 143 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 MPV17L2Q567V2 206 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 Q5VSD8 79 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 C9orf62Q8N4C0 152 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 Q8N814 137 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 FAT1Q14517 4588 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 DNAH8Q96JB1 4490 aa4.56□□□□□ -1.68
VPS50-211ENST00000474412 TRAV1-1A0A0B4J248 108 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 K7EP13 123 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 MGPP08493 103 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 OR5AL1P0C617 328 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 BCL2P10415 239 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 CAMPP49913 170 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 EIF5AP63241 154 aaKnown RBP4.55□□□□□ -1.68
VPS50-211ENST00000474412 MEF2BQ02080 365 aaPredicted RBP4.55□□□□□ -1.68
VPS50-211ENST00000474412 CLPSL2Q6UWE3 100 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 NTM-AS1Q6ZSK4 140 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 BAALCQ8WXS3 180 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 TPPP3Q9BW30 176 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 KLK12Q9UKR0 248 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 KIF25-AS1Q9Y6Z4 181 aa4.55□□□□□ -1.68
VPS50-211ENST00000474412 TRBV7-3A0A075B6L6 115 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 A0A1B0GVG6 124 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 K7EN84 100 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 SCGB1D1O95968 90 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
VPS50-211ENST00000474412 GNG4P50150 75 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 NKX2-5P52952 324 aaPredicted RBP4.54□□□□□ -1.68
VPS50-211ENST00000474412 SPANXN1Q5VSR9 72 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 ALKAL2Q6UX46 152 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 Q8N976 141 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 OR2D3Q8NGH3 330 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 OR10G8Q8NGN5 311 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 UBE2WQ96B02 151 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 AP1S3Q96PC3 154 aa4.54□□□□□ -1.68
VPS50-211ENST00000474412 IGKV2D-24A0A075B6R9 120 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 TRBV10-1A0A0K0K1A3 114 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 EPM2AB3EWF7 344 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 RAB4BP61018 213 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 AKAP14Q86UN6 197 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 SLC51BQ86UW2 128 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 FER1L6-AS1Q8NA97 138 aa4.53□□□□□ -1.68
VPS50-211ENST00000474412 RNASE7Q9H1E1 156 aaKnown RBP4.53□□□□□ -1.68
VPS50-211ENST00000474412 A0A087WWC5 75 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 CTRLP40313 264 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 RAB5CP51148 216 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 KIAA1644Q3SXP7 199 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 GAGE2AQ6NT46 116 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 ENHOQ6UWT2 76 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 C15orf54Q8N8G6 183 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 MED9Q9NWA0 146 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
VPS50-211ENST00000474412 FLG2Q5D862 2391 aaPredicted RBP4.51□□□□□ -1.69
VPS50-211ENST00000474412 A0A087WX48 190 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 TRAV8-3A0A0A6YYJ7 113 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 M0QY20 66 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 PDE6DO43924 150 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 IFNA1P01562 189 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 P01737 135 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 ATRAIDQ6UW56 229 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 LYZL1Q6UWQ5 148 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 Q6ZSA8 131 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 CHCHD5Q9BSY4 110 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 TMEM70Q9BUB7 260 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 VAX2Q9UIW0 290 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 URGCP-MRPS24S4R325 110 aa4.51□□□□□ -1.69
VPS50-211ENST00000474412 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 TEX46H3BTG2 121 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 ANGP03950 147 aaKnown RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 SMIM17P0DL12 118 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 SNRPEP62304 92 aaKnown RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 RBX1P62877 108 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 EIF5AL1Q6IS14 154 aaKnown RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 KRTAP26-1Q6PEX3 210 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 SCXQ7RTU7 201 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 OCC1Q8TAD7 63 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 GTSF1Q8WW33 167 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 FRZBQ92765 325 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
VPS50-211ENST00000474412 RPP21Q9H633 154 aaKnown RBP4.5□□□□□ -1.69
VPS50-211ENST00000474412 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms