RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 NSUN5P1Q3KNT7 163 aa10.82□□□□□ -0.68
SAMM50-203ENST00000474323 TRGV11A0A075B6L2 103 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 F5H697 171 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 RS1O15537 224 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 LITAFQ99732 161 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 MUC4Q99102 2169 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 IGHV3-64A0A075B6Q5 118 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 DNAJC30Q96LL9 226 aa10.81□□□□□ -0.68
SAMM50-203ENST00000474323 FBN2P35556 2912 aa10.8□□□□□ -0.68
SAMM50-203ENST00000474323 LMO4P61968 165 aa10.8□□□□□ -0.68
SAMM50-203ENST00000474323 SPANXCQ9NY87 97 aa10.8□□□□□ -0.68
SAMM50-203ENST00000474323 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
SAMM50-203ENST00000474323 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
SAMM50-203ENST00000474323 PRSS2P07478 247 aa10.8□□□□□ -0.68
SAMM50-203ENST00000474323 OPRPNQ99935 248 aaPredicted RBP10.8□□□□□ -0.68
SAMM50-203ENST00000474323 KMT2BQ9UMN6 2715 aaPredicted RBP10.8□□□□□ -0.68
SAMM50-203ENST00000474323 TENM4Q6N022 2769 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 FAM236AA0A1B0GUQ0 79 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 FAM236BA0A1B0GV22 79 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 SOCS3O14543 225 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 JPT2Q9H910 190 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 C3orf56Q8N813 242 aa10.79□□□□□ -0.68
SAMM50-203ENST00000474323 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
SAMM50-203ENST00000474323 A0A087WWL8 130 aa10.78□□□□□ -0.68
SAMM50-203ENST00000474323 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
SAMM50-203ENST00000474323 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
SAMM50-203ENST00000474323 CLEC2BQ92478 149 aa10.78□□□□□ -0.68
SAMM50-203ENST00000474323 G3V318 75 aa10.77□□□□□ -0.69
SAMM50-203ENST00000474323 ATP5G1P05496 136 aa10.77□□□□□ -0.69
SAMM50-203ENST00000474323 C20orf203Q8NBC4 194 aa10.77□□□□□ -0.69
SAMM50-203ENST00000474323 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
SAMM50-203ENST00000474323 I3L3M4 83 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 UQCRQO14949 82 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 NDUFA7O95182 113 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 LINC00694P0DN24 101 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 IGLV4-3A0A075B6K6 122 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 DEFB1P60022 68 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 MIAQ16674 131 aa10.76□□□□□ -0.69
SAMM50-203ENST00000474323 IGHV4-61A0A0C4DH41 118 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 ADAMTSL4-AS1Q5T5F5 129 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 M0QY20 66 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 TMEM61Q8N0U2 210 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 C10orf105Q8TEF2 133 aa10.75□□□□□ -0.69
SAMM50-203ENST00000474323 NAV2Q8IVL1 2488 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 DOPEY2Q9Y3R5 2298 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 ADARB2-AS1A8MUL3 147 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 KLLNB2CW77 178 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
SAMM50-203ENST00000474323 IGHV4-30-2A0A087WSY4 118 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 IGHV1-58A0A0C4DH39 117 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 F6UB75 175 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 MRPS36P82909 103 aaKnown RBP10.74□□□□□ -0.69
SAMM50-203ENST00000474323 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
SAMM50-203ENST00000474323 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
SAMM50-203ENST00000474323 ZFHX3Q15911 3703 aa10.73□□□□□ -0.69
SAMM50-203ENST00000474323 FAM74A4Q5TZK3 123 aa10.73□□□□□ -0.69
SAMM50-203ENST00000474323 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-203ENST00000474323 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 NPFFO15130 113 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 DCANP1Q8TF63 244 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 NBPF19A0A087WUL8 3843 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 ZANQ9Y493 2812 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 PRRC2AP48634 2157 aaKnown RBP10.72□□□□□ -0.69
SAMM50-203ENST00000474323 A0A1B0GX51 115 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 NDUFA4O00483 81 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
SAMM50-203ENST00000474323 Q6ZSV7 163 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 PYGO1Q9Y3Y4 419 aa10.72□□□□□ -0.69
SAMM50-203ENST00000474323 HERVK_113P63121 156 aa10.71□□□□□ -0.69
SAMM50-203ENST00000474323 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.69
SAMM50-203ENST00000474323 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
SAMM50-203ENST00000474323 MRAPQ8TCY5 172 aa10.71□□□□□ -0.69
SAMM50-203ENST00000474323 TIMM17BO60830 172 aa10.7□□□□□ -0.7
SAMM50-203ENST00000474323 APCP25054 2843 aa10.7□□□□□ -0.7
SAMM50-203ENST00000474323 CXCL5P42830 114 aa10.7□□□□□ -0.7
SAMM50-203ENST00000474323 C9orf85Q96MD7 179 aa10.7□□□□□ -0.7
SAMM50-203ENST00000474323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.71e-5■■■■□ 21.5
SAMM50-203ENST00000474323 J3KT08 172 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 SAA4P35542 130 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 KRTAP10-9P60411 292 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 SMCR5Q8TEV8 140 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 VSIG2Q96IQ7 327 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 IGHV3OR16-10A0A075B7F0 116 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 F5H768 121 aa10.69□□□□□ -0.7
SAMM50-203ENST00000474323 TMEM89A2RUT3 159 aa10.68□□□□□ -0.7
SAMM50-203ENST00000474323 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
SAMM50-203ENST00000474323 CD28P10747 220 aa10.68□□□□□ -0.7
SAMM50-203ENST00000474323 KHDC1LQ5JSQ8 128 aa10.68□□□□□ -0.7
SAMM50-203ENST00000474323 CSPG4Q6UVK1 2322 aa10.68□□□□□ -0.7
SAMM50-203ENST00000474323 NPC2P61916 151 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms