RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 LINC01556Q5JQF7 62 aa7.45□□□□□ -1.22
SEMA4D-216ENST00000474258 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
SEMA4D-216ENST00000474258 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
SEMA4D-216ENST00000474258 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 PSCAO43653 123 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 GCSHP23434 173 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 RHOHQ15669 191 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
SEMA4D-216ENST00000474258 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 C5orf52A6NGY3 159 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 A8MWV9 139 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 NDUFA6P56556 154 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 LELP1Q5T871 98 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 MRAP2Q96G30 205 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 JPT2Q9H910 190 aa7.43□□□□□ -1.22
SEMA4D-216ENST00000474258 LRCOL1A6NCL2 159 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 PRSS47A8MTI9 375 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 D6R8Y8 96 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 CKS2P33552 79 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 UFSP1Q6NVU6 142 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 C18orf32Q8TCD1 76 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 SAMD10Q9BYL1 202 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 GTSF1LQ9H1H1 148 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
SEMA4D-216ENST00000474258 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 S100A6P06703 90 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 SMIM17P0DL12 118 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 ESDP10768 282 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 SNRPEP62304 92 aaKnown RBP7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 Q5VSD8 79 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 NTN5Q8WTR8 489 aaPredicted RBP7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 PRELID3AQ96N28 172 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 Q9HAA7 133 aa7.41□□□□□ -1.22
SEMA4D-216ENST00000474258 A0A087WWL8 130 aa7.4□□□□□ -1.22
SEMA4D-216ENST00000474258 PPP1R17O96001 155 aa7.4□□□□□ -1.22
SEMA4D-216ENST00000474258 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
SEMA4D-216ENST00000474258 NRACQ8N912 160 aa7.4□□□□□ -1.22
SEMA4D-216ENST00000474258 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 RHODO00212 210 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 NPYP01303 97 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 LINC00310P59036 64 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 LAGE3Q14657 143 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 BAGE3Q86Y29 109 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 Q8N814 137 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 TM2D2Q9BX73 214 aa7.39□□□□□ -1.23
SEMA4D-216ENST00000474258 LOC105371267A0A1B0GV96 52 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 M0QY20 66 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 NUPR1O60356 82 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 SMR3BP02814 79 aaPredicted RBP7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 MGPP08493 103 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 SUMO4Q6EEV6 95 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 Q6ZSN1 163 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 NIT1Q86X76 327 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 URB1-AS1Q96HZ7 61 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 C20orf78Q9BR46 151 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 TMEM70Q9BUB7 260 aa7.38□□□□□ -1.23
SEMA4D-216ENST00000474258 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 TRAV26-2A0A0B4J265 109 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 GAGE12JA6NER3 117 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 LINC01546A6NGU7 62 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 F5H697 171 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 SERF1AO75920 110 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 NCR2O95944 276 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 LINC00614P0C842 121 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 GAGE1Q13065 139 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 GAGE4Q13068 117 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 GAGE5Q13069 117 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 GAGE13Q4V321 117 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 HIST3H2BBQ8N257 126 aa7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
SEMA4D-216ENST00000474258 LINC00694P0DN24 101 aa7.36□□□□□ -1.23
SEMA4D-216ENST00000474258 FAM74A4Q5TZK3 123 aa7.36□□□□□ -1.23
SEMA4D-216ENST00000474258 PACRGQ96M98 296 aaPredicted RBP7.36□□□□□ -1.23
SEMA4D-216ENST00000474258 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
SEMA4D-216ENST00000474258 FAT1Q14517 4588 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 H7C1H1 209 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 HAMPP81172 84 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 ZNF56Q15929 161 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 Q8N8P6 123 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
SEMA4D-216ENST00000474258 NXT2Q9NPJ8 142 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms