RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 MIAQ16674 131 aa10.43□□□□□ -0.74
NHLRC3-204ENST00000473371 AVPP01185 164 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 GAGE5Q13069 117 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 GAGE6Q13070 117 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 LINC01600Q96MT4 127 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 RBMY1A1P0DJD3 496 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 RBMY1CP0DJD4 496 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 ATP5J2P56134 94 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 RBMY1FQ15415 496 aaKnown RBP10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 Q6ZSV7 163 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 VSIG2Q96IQ7 327 aa10.42□□□□□ -0.74
NHLRC3-204ENST00000473371 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 TTC32Q5I0X7 151 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 CSPG4Q6UVK1 2322 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 TINCRA0A1B0GVN0 87 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 H7C423 109 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 CLEC2BQ92478 149 aa10.41□□□□□ -0.74
NHLRC3-204ENST00000473371 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 NHLRC4P0CG21 123 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 GNLYP22749 145 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 DUX3Q96PT4 197 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 Q9UF83 564 aa10.4□□□□□ -0.74
NHLRC3-204ENST00000473371 PRM2P04554 102 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 B5MCH6 92 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 H3BT86 120 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
NHLRC3-204ENST00000473371 IFITM1P13164 125 aa10.38□□□□□ -0.75
NHLRC3-204ENST00000473371 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
NHLRC3-204ENST00000473371 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
NHLRC3-204ENST00000473371 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
NHLRC3-204ENST00000473371 Q6ZSN1 163 aa10.38□□□□□ -0.75
NHLRC3-204ENST00000473371 HOXD3P31249 432 aaPredicted RBP10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 DEFB131AP59861 70 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 DAND5Q8N907 189 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 B4DSR2 109 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 Q6Q795 121 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 LINC00467Q9BRT7 94 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
NHLRC3-204ENST00000473371 CREBBPQ92793 2442 aa10.36□□□□□ -0.75
NHLRC3-204ENST00000473371 LST1O00453 97 aa10.36□□□□□ -0.75
NHLRC3-204ENST00000473371 ZNF415Q09FC8 603 aa10.36□□□□□ -0.75
NHLRC3-204ENST00000473371 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 MAP1AP78559 2803 aaPredicted RBP10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE12JA6NER3 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 TIMM17BO60830 172 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE7O76087 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 GAGE4Q13068 117 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
NHLRC3-204ENST00000473371 DGAT2L7PQ6IED9 249 aa10.34□□□□□ -0.75
NHLRC3-204ENST00000473371 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 NCOR2Q9Y618 2525 aa10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
NHLRC3-204ENST00000473371 NDUFA1O15239 70 aa10.32□□□□□ -0.76
NHLRC3-204ENST00000473371 LINC01587Q99440 93 aa10.32□□□□□ -0.76
NHLRC3-204ENST00000473371 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
NHLRC3-204ENST00000473371 TIRAPP58753 221 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 SLURP1P55000 103 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 PIK3CD-AS1Q5SR53 167 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
NHLRC3-204ENST00000473371 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 Q9H8V8 135 aa10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 FAM240AA0A1B0GVK7 77 aa10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 LINC00308Q8TCZ7 52 aa10.3□□□□□ -0.76
NHLRC3-204ENST00000473371 COX6A2Q02221 97 aa10.29□□□□□ -0.76
NHLRC3-204ENST00000473371 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
NHLRC3-204ENST00000473371 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
NHLRC3-204ENST00000473371 A8MTW9 85 aa10.29□□□□□ -0.76
NHLRC3-204ENST00000473371 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
NHLRC3-204ENST00000473371 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
NHLRC3-204ENST00000473371 HERVK_113P63121 156 aa10.28□□□□□ -0.76
NHLRC3-204ENST00000473371 C11orf72Q8NBR9 251 aa10.28□□□□□ -0.76
NHLRC3-204ENST00000473371 VPREB3Q9UKI3 123 aa10.28□□□□□ -0.76
NHLRC3-204ENST00000473371 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.77
NHLRC3-204ENST00000473371 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms