RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 SMIM15Q7Z3B0 74 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 NEXN-AS1Q8NBZ9 246 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 ATP6V0E2Q8NHE4 81 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 DPH3P1Q9H4G8 78 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 Q9H8V8 135 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
SCN9A-206ENST00000472119 TRBV7-3A0A075B6L6 115 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 TRAV26-2A0A0B4J265 109 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 TRBV10-1A0A0K0K1A3 114 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 M0QY20 66 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 PPP1R2P9O14990 202 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 LINC00694P0DN24 101 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 CAMPP49913 170 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 RIGQ13278 110 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 MRPL54Q6P161 138 aaKnown RBP4.57□□□□□ -1.68
SCN9A-206ENST00000472119 SH2D6Q7Z4S9 175 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 SLC7A5P1Q8MH63 180 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 GTSF1LQ9H1H1 148 aa4.57□□□□□ -1.68
SCN9A-206ENST00000472119 MRPS16Q9Y3D3 137 aaKnown RBP4.57□□□□□ -1.68
SCN9A-206ENST00000472119 IGHV3-38A0A0C4DH36 116 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 UBE2D3P61077 147 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 UBE2D2P62837 147 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 OR10J3Q5JRS4 329 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 C10orf91Q5T1B1 145 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 WFDC10BQ8IUB3 73 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 GATD1Q8NB37 220 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 DEFB104AQ8WTQ1 72 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 UPK3BQ9BT76 320 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 TMEM191AQ9H0A3 160 aa4.56□□□□□ -1.68
SCN9A-206ENST00000472119 CARHSP1Q9Y2V2 147 aaKnown RBP4.56□□□□□ -1.68
SCN9A-206ENST00000472119 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 C7orf77A4D0Y5 90 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 H7C1H1 209 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 SIVA1O15304 175 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 APOC3P02656 99 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 RAB4AP20338 218 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 RASL11AQ6T310 242 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 AMN1Q8IY45 258 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 RPL39LQ96EH5 51 aaKnown RBP4.55□□□□□ -1.68
SCN9A-206ENST00000472119 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 RPS10P5Q9NQ39 176 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 NIT2Q9NQR4 276 aa4.55□□□□□ -1.68
SCN9A-206ENST00000472119 TRAV8-6A0A0B4J262 113 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 A0A1B0GXF2 115 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 SMKR1H3BMG3 65 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 RPS10P46783 165 aaKnown RBP4.54□□□□□ -1.68
SCN9A-206ENST00000472119 HBBP68871 147 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 MRPL51Q4U2R6 128 aaKnown RBP4.54□□□□□ -1.68
SCN9A-206ENST00000472119 LELP1Q5T871 98 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 FAM104BQ5XKR9 115 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 Q6ZR54 194 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
SCN9A-206ENST00000472119 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 A0A087WWC5 75 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 A0A1B0GW15 77 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 NCR2O95944 276 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 S100A8P05109 93 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 IGHV3-30-3P0DP02 117 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 NTM-AS1Q6ZSK4 140 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 DAZ4Q86SG3 579 aaKnown RBP4.53□□□□□ -1.68
SCN9A-206ENST00000472119 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.53□□□□□ -1.68
SCN9A-206ENST00000472119 IMMP2LQ96T52 175 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 DAZ3Q9NR90 486 aaKnown RBP4.53□□□□□ -1.68
SCN9A-206ENST00000472119 URGCP-MRPS24S4R325 110 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 RYR2Q92736 4967 aa4.53□□□□□ -1.68
SCN9A-206ENST00000472119 RYR3Q15413 4870 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM262E9PQX1 116 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 SNAPINO95295 136 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 DNAH10OSP0CZ25 163 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 RHEBQ15382 184 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 C1orf134Q5TEV5 83 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 KCNIP4Q6PIL6 250 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 ATP5L2Q7Z4Y8 100 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 SVBPQ8N300 66 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 FRZBQ92765 325 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 BTF3L4Q96K17 158 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 CHCHD5Q9BSY4 110 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 ST20Q9HBF5 79 aa4.52□□□□□ -1.69
SCN9A-206ENST00000472119 TRAV9-2A0A087WT02 112 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 D6R8Y8 96 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 RTL8CO15255 209 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 S100PP25815 95 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 CKS2P33552 79 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 GAGE6Q13070 117 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 TTC32Q5I0X7 151 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 ATRAIDQ6UW56 229 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 NIT1Q86X76 327 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM242Q9NWH2 141 aa4.51□□□□□ -1.69
SCN9A-206ENST00000472119 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms