RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
PSPC1-203ENST00000471658 LINC00310P59036 64 aa13.21□□□□□ -0.29
PSPC1-203ENST00000471658 FA2HQ7L5A8 372 aa13.21□□□□□ -0.29
PSPC1-203ENST00000471658 TRBV6-8A0A0A6YYG3 113 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 NUPR1O60356 82 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 LINC00614P0C842 121 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 FCER1GP30273 86 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 RAB5BP61020 215 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 CASC10Q5T4H9 136 aa13.21□□□□□ -0.3
PSPC1-203ENST00000471658 RNASEKQ6P5S7 137 aaKnown RBP13.21□□□□□ -0.3
PSPC1-203ENST00000471658 CHCHD7Q9BUK0 85 aa13.2□□□□□ -0.3
PSPC1-203ENST00000471658 SERF1AO75920 110 aa13.19□□□□□ -0.3
PSPC1-203ENST00000471658 AMTP48728 403 aa13.19□□□□□ -0.3
PSPC1-203ENST00000471658 NDUFA6P56556 154 aa13.19□□□□□ -0.3
PSPC1-203ENST00000471658 TENM2Q9NT68 2774 aa13.18□□□□□ -0.3
PSPC1-203ENST00000471658 LINC01546A6NGU7 62 aa13.18□□□□□ -0.3
PSPC1-203ENST00000471658 LINC00588Q9Y4M8 146 aa13.18□□□□□ -0.3
PSPC1-203ENST00000471658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
PSPC1-203ENST00000471658 IGHV1-24A0A0C4DH33 117 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
PSPC1-203ENST00000471658 C3orf84H3BNL1 204 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 ESDP10768 282 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 TIRAPP58753 221 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 LAGE3Q14657 143 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 LELP1Q5T871 98 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 TRBV25-1A0A075B6N4 114 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 TCTAP57738 103 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 AP5S1Q9NUS5 200 aa13.17□□□□□ -0.3
PSPC1-203ENST00000471658 TMEM97Q5BJF2 176 aa13.16□□□□□ -0.3
PSPC1-203ENST00000471658 CCL18P55774 89 aa13.15□□□□□ -0.3
PSPC1-203ENST00000471658 RPL39P62891 51 aaKnown RBP13.15□□□□□ -0.3
PSPC1-203ENST00000471658 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
PSPC1-203ENST00000471658 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
PSPC1-203ENST00000471658 GAGE6Q13070 117 aa13.14□□□□□ -0.31
PSPC1-203ENST00000471658 ORMDL2Q53FV1 153 aa13.14□□□□□ -0.31
PSPC1-203ENST00000471658 CHCHD1Q96BP2 118 aaKnown RBP13.14□□□□□ -0.31
PSPC1-203ENST00000471658 CHCHD5Q9BSY4 110 aa13.14□□□□□ -0.31
PSPC1-203ENST00000471658 A0A096LNJ9 63 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 WFDC10BQ8IUB3 73 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 FAM19A2Q8N3H0 131 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 Q8N3U1 123 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 C20orf203Q8NBC4 194 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 LYSTQ99698 3801 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 K7EMI3 77 aa13.13□□□□□ -0.31
PSPC1-203ENST00000471658 BTF3P20290 206 aaKnown RBP13.13□□□□□ -0.31
PSPC1-203ENST00000471658 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
PSPC1-203ENST00000471658 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
PSPC1-203ENST00000471658 TRAV8-6A0A0B4J262 113 aa13.11□□□□□ -0.31
PSPC1-203ENST00000471658 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
PSPC1-203ENST00000471658 HSBP1O75506 76 aa13.11□□□□□ -0.31
PSPC1-203ENST00000471658 C2orf66Q6UXQ4 117 aa13.11□□□□□ -0.31
PSPC1-203ENST00000471658 UBE2DNLQ8IWF7 75 aa13.1□□□□□ -0.31
PSPC1-203ENST00000471658 DNAH1Q9P2D7 4330 aa13.1□□□□□ -0.31
PSPC1-203ENST00000471658 UBE2L6O14933 153 aa13.1□□□□□ -0.31
PSPC1-203ENST00000471658 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
PSPC1-203ENST00000471658 S100A6P06703 90 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 FGF6P10767 208 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 Q8N976 141 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
PSPC1-203ENST00000471658 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 IGHV3-33P01772 117 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 HBDP02042 147 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 IGHV3-30-3P0DP02 117 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
PSPC1-203ENST00000471658 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
PSPC1-203ENST00000471658 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
PSPC1-203ENST00000471658 RBX1P62877 108 aa13.06□□□□□ -0.32
PSPC1-203ENST00000471658 TMEM18Q96B42 140 aa13.06□□□□□ -0.32
PSPC1-203ENST00000471658 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
PSPC1-203ENST00000471658 LINC00173Q6ZV60 143 aa13.06□□□□□ -0.32
PSPC1-203ENST00000471658 FAM104AQ969W3 186 aa13.06□□□□□ -0.32
PSPC1-203ENST00000471658 H7C423 109 aa13.05□□□□□ -0.32
PSPC1-203ENST00000471658 SIVA1O15304 175 aa13.05□□□□□ -0.32
PSPC1-203ENST00000471658 AMMECR1LQ6DCA0 310 aa13.05□□□□□ -0.32
PSPC1-203ENST00000471658 Q9H8V8 135 aa13.05□□□□□ -0.32
PSPC1-203ENST00000471658 A0A087WX48 190 aa13.04□□□□□ -0.32
PSPC1-203ENST00000471658 IGIPA6NJ69 53 aa13.04□□□□□ -0.32
PSPC1-203ENST00000471658 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
PSPC1-203ENST00000471658 SCGB3A1Q96QR1 104 aa13.04□□□□□ -0.32
PSPC1-203ENST00000471658 FABP4P15090 132 aa13.03□□□□□ -0.32
PSPC1-203ENST00000471658 G0S2P27469 103 aa13.03□□□□□ -0.32
PSPC1-203ENST00000471658 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
PSPC1-203ENST00000471658 HIST3H2BBQ8N257 126 aa13.03□□□□□ -0.32
PSPC1-203ENST00000471658 C5orf52A6NGY3 159 aa13.02□□□□□ -0.32
PSPC1-203ENST00000471658 LGALS9CQ6DKI2 356 aa13.02□□□□□ -0.32
PSPC1-203ENST00000471658 LY6G6CO95867 125 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 DNAH10OSP0CZ25 163 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 Q6ZUT4 128 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 ALMS1Q8TCU4 4167 aa13.02□□□□□ -0.33
PSPC1-203ENST00000471658 A0A1B0GUV1 79 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms