RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 P0C880 135 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 WFDC2Q14508 124 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 PMCHL1Q16048 86 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 DEFB134Q4QY38 66 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 C1orf137Q5JT78 98 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 HEPN1Q6WQI6 88 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 FAM167A-AS1Q96KT0 104 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 AMELYQ99218 206 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 ORMDL1Q9P0S3 153 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 PRO1854Q9UHT4 67 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 EDC4Q6P2E9 1401 aaKnown RBP2.13□□□□□ -2.07
COL11A1-208ENST00000470170 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.13□□□□□ -2.07
COL11A1-208ENST00000470170 BDP1A6H8Y1 2624 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 TRANK1O15050 2925 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 CASZ1Q86V15 1759 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 TOPAZ1Q8N9V7 1692 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 MALRD1Q5VYJ5 2156 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 CCDC88CQ9P219 2028 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 NUP188Q5SRE5 1749 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 TRBV7-3A0A075B6L6 115 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 H3BUT2 72 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 COX6CP09669 75 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 HRES1P13985 223 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 SPATA45Q537H7 98 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 C10orf128Q5T292 105 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 C18orf32Q8TCD1 76 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 IFI27L1Q96BM0 104 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 DMAC1Q96GE9 116 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 CCL26Q9Y258 94 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 MLH3Q9UHC1 1453 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 RREB1Q92766 1687 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 ITSN2Q9NZM3 1697 aa2.12□□□□□ -2.07
COL11A1-208ENST00000470170 ANK1P16157 1881 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 COL24A1Q17RW2 1714 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 TNS1Q9HBL0 1735 aaKnown RBP2.11□□□□□ -2.07
COL11A1-208ENST00000470170 MAST4O15021 2626 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 SHROOM3Q8TF72 1996 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 TMEM131LA2VDJ0 1609 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 H7BZZ5 65 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 LINC01600Q96MT4 127 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 MRPL36Q9P0J6 103 aaKnown RBP2.11□□□□□ -2.07
COL11A1-208ENST00000470170 CROCC2H7BZ55 1655 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 PEAK1Q9H792 1746 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 MYH8P13535 1937 aa2.11□□□□□ -2.07
COL11A1-208ENST00000470170 RGPD4Q7Z3J3 1758 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 ANKRD11Q6UB99 2663 aaPredicted RBP2.1□□□□□ -2.07
COL11A1-208ENST00000470170 TTC28Q96AY4 2481 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 PLXNA2O75051 1894 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 ZNF462Q96JM2 2506 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 A0A0J9YY99 117 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 F2Z2F3 143 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 EDDM3BP56851 147 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 UBE2D3P61077 147 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 UBE2D2P62837 147 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 KLKP1Q107X0 134 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 CSAG1Q6PB30 78 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 LINC00643Q86TS7 51 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 HIGD1BQ9P298 99 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 MON2Q7Z3U7 1717 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 ZDBF2Q9HCK1 2354 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 SDK2Q58EX2 2172 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 FLNBO75369 2602 aaKnown RBP2.1□□□□□ -2.07
COL11A1-208ENST00000470170 SAMD9LQ8IVG5 1584 aa2.1□□□□□ -2.07
COL11A1-208ENST00000470170 KMT2BQ9UMN6 2715 aaPredicted RBP2.1□□□□□ -2.07
COL11A1-208ENST00000470170 FASNP49327 2511 aaKnown RBP2.1□□□□□ -2.07
COL11A1-208ENST00000470170 ZC3H13Q5T200 1668 aaKnown RBP2.09□□□□□ -2.07
COL11A1-208ENST00000470170 MUC6Q6W4X9 2439 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 LRRIQ1Q96JM4 1722 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 KIAA1549Q9HCM3 1950 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 TOP2AP11388 1531 aaKnown RBP2.09□□□□□ -2.07
COL11A1-208ENST00000470170 KCPQ6ZWJ8 1503 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 UGGT2Q9NYU1 1516 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 A0A0G2JND7 137 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 CHKB-CPT1BH3BT56 60 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 TFF1P04155 84 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 SMIM13P0DJ93 91 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 VMO1Q7Z5L0 202 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 Q8N6K4 173 aa2.09□□□□□ -2.07
COL11A1-208ENST00000470170 PLXNA4Q9HCM2 1894 aa2.09□□□□□ -2.08
COL11A1-208ENST00000470170 HFM1A2PYH4 1435 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 USP9XQ93008 2570 aaPredicted RBP2.08□□□□□ -2.08
COL11A1-208ENST00000470170 KIAA1549LQ6ZVL6 1849 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 TRBV25-1A0A075B6N4 114 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 TRAV22A0A0B4J277 110 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 LOC285095A0A1B0GVY8 99 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 UBE2D1P51668 147 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 ELOF1P60002 83 aaKnown RBP2.08□□□□□ -2.08
COL11A1-208ENST00000470170 TMEM170BQ5T4T1 132 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 USP32Q8NFA0 1604 aa2.08□□□□□ -2.08
COL11A1-208ENST00000470170 CLTCQ00610 1675 aaKnown RBP2.08□□□□□ -2.08
COL11A1-208ENST00000470170 DUOX2Q9NRD8 1548 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 SETXQ7Z333 2677 aaKnown RBP2.07□□□□□ -2.08
COL11A1-208ENST00000470170 IQGAP2Q13576 1575 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 PTPN23Q9H3S7 1636 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 NAV2Q8IVL1 2488 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 A0A087WWC5 75 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms