RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PPDPFLQ8WWR9 84 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 CLUHP3Q96NS8 147 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 MAP6D1Q9H9H5 199 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 Q9UF83 564 aa9.92□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV3-64A0A075B6Q5 118 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 ZNF418Q8TF45 676 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-209ENST00000470026 SPXQ9BT56 116 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 PRM2P04554 102 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
BRCA1-209ENST00000470026 CACNA1AO00555 2505 aa9.9□□□□□ -0.82
BRCA1-209ENST00000470026 HTN1P15515 57 aa9.9□□□□□ -0.82
BRCA1-209ENST00000470026 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-209ENST00000470026 SPANXDQ9BXN6 97 aa9.9□□□□□ -0.82
BRCA1-209ENST00000470026 SPANXCQ9NY87 97 aa9.9□□□□□ -0.82
BRCA1-209ENST00000470026 ERG28Q9UKR5 140 aa9.9□□□□□ -0.82
BRCA1-209ENST00000470026 RS1O15537 224 aa9.89□□□□□ -0.83
BRCA1-209ENST00000470026 DEFB114Q30KQ6 69 aa9.89□□□□□ -0.83
BRCA1-209ENST00000470026 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
BRCA1-209ENST00000470026 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
BRCA1-209ENST00000470026 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 SCGB1C2P0DMR2 95 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 FHL3Q13643 280 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 RAX2Q96IS3 184 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 FLNCQ14315 2725 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 RNF183Q96D59 192 aa9.88□□□□□ -0.83
BRCA1-209ENST00000470026 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 INSP01308 110 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 LRRC75A-AS1Q8N1F1 130 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 LINC01587Q99440 93 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 NDUFA12Q9UI09 145 aa9.87□□□□□ -0.83
BRCA1-209ENST00000470026 IGSF10Q6WRI0 2623 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 ZFAND6Q6FIF0 208 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 Q6ZUT4 128 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 IL17DQ8TAD2 202 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 CRYBG3Q68DQ2 2970 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 SLC25A20O43772 301 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 TIMM17BO60830 172 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 TIRAPP58753 221 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
BRCA1-209ENST00000470026 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 DYNLRB2Q8TF09 96 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 FBN2P35556 2912 aa9.86□□□□□ -0.83
BRCA1-209ENST00000470026 USP9YO00507 2555 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-209ENST00000470026 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
BRCA1-209ENST00000470026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-209ENST00000470026 IGKV2-29A2NJV5 120 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-209ENST00000470026 ADARB2-AS1A8MUL3 147 aa9.85□□□□□ -0.83
BRCA1-209ENST00000470026 MIAQ16674 131 aa9.85□□□□□ -0.83
BRCA1-209ENST00000470026 KRTAP10-9P60411 292 aa9.85□□□□□ -0.83
BRCA1-209ENST00000470026 DEFB113Q30KQ7 82 aa9.85□□□□□ -0.83
BRCA1-209ENST00000470026 TRAV25A0A0B4J276 109 aa9.84□□□□□ -0.83
BRCA1-209ENST00000470026 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
BRCA1-209ENST00000470026 C9JAW5 83 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 ATXN8Q156A1 80 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 CSMD2Q7Z408 3487 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
BRCA1-209ENST00000470026 MAP1AP78559 2803 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-209ENST00000470026 CREBBPQ92793 2442 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 TRIAP1O43715 76 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 ZANQ9Y493 2812 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 A8MZ25 164 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 IFITM1P13164 125 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
BRCA1-209ENST00000470026 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
BRCA1-209ENST00000470026 H7C2G1 150 aa9.81□□□□□ -0.84
BRCA1-209ENST00000470026 NDUFA1O15239 70 aa9.81□□□□□ -0.84
BRCA1-209ENST00000470026 XGP55808 180 aa9.81□□□□□ -0.84
BRCA1-209ENST00000470026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-209ENST00000470026 YAE1D1Q9NRH1 226 aa9.81□□□□□ -0.84
BRCA1-209ENST00000470026 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
BRCA1-209ENST00000470026 IGHV3OR16-12A0A075B7B8 117 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 MT-ATP8P03928 68 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 Q1RN00 199 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 Q6ZSV7 163 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
BRCA1-209ENST00000470026 TRBV10-2A0A0K0K1G8 114 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 CIDEAO60543 219 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 PRB1P04280 392 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 PRSS2P07478 247 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 KHDC1LQ5JSQ8 128 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
BRCA1-209ENST00000470026 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
BRCA1-209ENST00000470026 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
BRCA1-209ENST00000470026 A0A1B0GV72 72 aa9.79□□□□□ -0.84
BRCA1-209ENST00000470026 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
BRCA1-209ENST00000470026 Q96MF0 132 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms