RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 KTN1Q86UP2 1357 aaKnown RBP0.78□□□□□ -2.28
VPS8-220ENST00000469713 CNTLNQ9NXG0 1405 aa0.78□□□□□ -2.28
VPS8-220ENST00000469713 NRKQ7Z2Y5 1582 aa0.78□□□□□ -2.29
VPS8-220ENST00000469713 AKAP12Q02952 1782 aa0.78□□□□□ -2.29
VPS8-220ENST00000469713 PARP14Q460N5 1801 aa0.78□□□□□ -2.29
VPS8-220ENST00000469713 RANBP2P49792 3224 aaKnown RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 TENM2Q9NT68 2774 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 NBDYA0A0U1RRE5 68 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 S100A8P05109 93 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 C8orf59Q8N0T1 100 aaPredicted RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 DPH3P1Q9H4G8 78 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 LINC00474Q9P2X8 69 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 CC2D2AQ9P2K1 1620 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 ZNF142P52746 1687 aaPredicted RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 NRXN2Q9P2S2 1712 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 ZGRF1Q86YA3 2104 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 TET1Q8NFU7 2136 aa0.77□□□□□ -2.29
VPS8-220ENST00000469713 RIF1Q5UIP0 2472 aaKnown RBP0.77□□□□□ -2.29
VPS8-220ENST00000469713 CEP250Q9BV73 2442 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 CNTRLQ7Z7A1 2325 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 PLXNA1Q9UIW2 1896 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 PHIPQ8WWQ0 1821 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 DOCK2Q92608 1830 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 NWD2Q9ULI1 1742 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 ABCC10Q5T3U5 1492 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 CDK12Q9NYV4 1490 aaPredicted RBP0.76□□□□□ -2.29
VPS8-220ENST00000469713 HIGD1CA8MV81 97 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 HCG22E2RYF7 251 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 M0R143 59 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 FXYD3Q14802 87 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 C12orf73Q69YU5 71 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 ACBD7Q8N6N7 88 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 TSLPQ969D9 159 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 LINC00208Q96KT6 92 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 FSIP2Q5CZC0 6907 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 PRRC2CQ9Y520 2896 aaKnown RBP0.76□□□□□ -2.29
VPS8-220ENST00000469713 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 MED12Q93074 2177 aa0.76□□□□□ -2.29
VPS8-220ENST00000469713 EP400Q96L91 3159 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 PSME4Q14997 1843 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 SPHKAPQ2M3C7 1700 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 ABCA3Q99758 1704 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 CPSF1Q10570 1443 aaKnown RBP0.75□□□□□ -2.29
VPS8-220ENST00000469713 VPS8Q8N3P4 1428 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 NEBP20929 6669 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 HERC1Q15751 4861 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 RBAKDNA6NC62 111 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 FAM24AA6NFZ4 105 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 UBE2D1P51668 147 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 PKIAP61925 76 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 CYP2G1PQ6ZSU1 146 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 C5orf38Q86SI9 138 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 Q86TA4 180 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 C20orf197Q8N268 126 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 TTC9CQ8N5M4 171 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 SPANXDQ9BXN6 97 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 SNHG12Q9BXW3 62 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 MXRA5Q9NR99 2828 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 DNHD1Q96M86 4753 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 SPEGQ15772 3267 aa0.75□□□□□ -2.29
VPS8-220ENST00000469713 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 MAPKBP1O60336 1514 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 ESPL1Q14674 2120 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 IFT140Q96RY7 1462 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 CENPFP49454 3210 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 DAPK1P53355 1430 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 SPTAN1Q13813 2472 aaKnown RBP0.74□□□□□ -2.29
VPS8-220ENST00000469713 HYDINQ4G0P3 5121 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 TPRP12270 2363 aaKnown RBP0.74□□□□□ -2.29
VPS8-220ENST00000469713 TRAV13-2A0A0B4J235 113 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 TRBV10-3A0A0K0K1G6 114 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 TEX49A0A1B0GTD5 131 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 CLPSL1A2RUU4 121 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 SNCAP37840 140 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 CCL8P80075 99 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 ZNF56Q15929 161 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 XAF1Q6GPH4 301 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 DEFB132Q7Z7B7 95 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 NDUFA11Q86Y39 141 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 LINC00312Q9Y6C7 94 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 LOC285556D6RIA3 1793 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 TEX15Q9BXT5 2789 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 TNS1Q9HBL0 1735 aaKnown RBP0.74□□□□□ -2.29
VPS8-220ENST00000469713 ANKRD26Q9UPS8 1709 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 DSPP15924 2871 aaKnown RBP0.74□□□□□ -2.29
VPS8-220ENST00000469713 ZDBF2Q9HCK1 2354 aa0.74□□□□□ -2.29
VPS8-220ENST00000469713 HIVEP1P15822 2718 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 CASKIN1Q8WXD9 1431 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 CELSR1Q9NYQ6 3014 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 TLN1Q9Y490 2541 aaKnown RBP0.73□□□□□ -2.29
VPS8-220ENST00000469713 TET3O43151 1660 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 UBE2L5PA0A1B0GUS4 154 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 A0A1W2PPM0 123 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 TMEM262E9PQX1 116 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 FXYD1O00168 92 aa0.73□□□□□ -2.29
VPS8-220ENST00000469713 SIX6O95475 246 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms