RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
COL5A1-207ENST00000469093 TRBV25-1A0A075B6N4 114 aa7.81□□□□□ -1.16
COL5A1-207ENST00000469093 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
COL5A1-207ENST00000469093 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
COL5A1-207ENST00000469093 TMEM241Q24JQ0 296 aa7.81□□□□□ -1.16
COL5A1-207ENST00000469093 SLPIP03973 132 aa7.8□□□□□ -1.16
COL5A1-207ENST00000469093 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
COL5A1-207ENST00000469093 REG3AQ06141 175 aa7.8□□□□□ -1.16
COL5A1-207ENST00000469093 IQCJQ1A5X6 159 aa7.8□□□□□ -1.16
COL5A1-207ENST00000469093 NAT8Q9UHE5 227 aa7.8□□□□□ -1.16
COL5A1-207ENST00000469093 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 C9JQL5 133 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 M0QY20 66 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 P01737 135 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 C20orf203Q8NBC4 194 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 DPH3Q96FX2 82 aa7.79□□□□□ -1.16
COL5A1-207ENST00000469093 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 A0A087WYN8 130 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 SMIM17P0DL12 118 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 RPS20P60866 119 aaKnown RBP7.78□□□□□ -1.16
COL5A1-207ENST00000469093 ADIRFQ15847 76 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 OCC1Q8TAD7 63 aa7.78□□□□□ -1.16
COL5A1-207ENST00000469093 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
COL5A1-207ENST00000469093 F8W036 122 aa7.77□□□□□ -1.17
COL5A1-207ENST00000469093 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
COL5A1-207ENST00000469093 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
COL5A1-207ENST00000469093 GFRA4Q9GZZ7 299 aa7.77□□□□□ -1.17
COL5A1-207ENST00000469093 IGLV4-60A0A075B6I1 120 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 TMEM218A2RU14 115 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 PNRC1Q12796 327 aaPredicted RBP7.76□□□□□ -1.17
COL5A1-207ENST00000469093 LINC01551Q86U37 167 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 OR2D3Q8NGH3 330 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 RNF185Q96GF1 192 aa7.76□□□□□ -1.17
COL5A1-207ENST00000469093 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.75□□□□□ -1.17
COL5A1-207ENST00000469093 H7C1H1 209 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
COL5A1-207ENST00000469093 GZMBP10144 247 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
COL5A1-207ENST00000469093 SUMO4Q6EEV6 95 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 SPACA4Q8TDM5 124 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
COL5A1-207ENST00000469093 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
COL5A1-207ENST00000469093 K7EN84 100 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 MGPP08493 103 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 FAM231DQ6ZW35 169 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 ISOC2Q96AB3 205 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 TPPP3Q9BW30 176 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 SEC11CQ9BY50 192 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
COL5A1-207ENST00000469093 OSTCQ9NRP0 149 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 PLAC8Q9NZF1 115 aa7.74□□□□□ -1.17
COL5A1-207ENST00000469093 C19orf71A6NCJ1 209 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 PPP1R2P9O14990 202 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 FER1L6-AS1Q8NA97 138 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 NUDT10Q8NFP7 164 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 NUDT11Q96G61 164 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 PKHD1L1Q86WI1 4243 aa7.73□□□□□ -1.17
COL5A1-207ENST00000469093 A8MWL6 223 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 PHOX2AO14813 284 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 CACNG7P62955 275 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 RASL11AQ6T310 242 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
COL5A1-207ENST00000469093 COX6A2Q02221 97 aa7.71□□□□□ -1.18
COL5A1-207ENST00000469093 CT83Q5H943 113 aa7.71□□□□□ -1.18
COL5A1-207ENST00000469093 C15orf56Q8N910 161 aa7.71□□□□□ -1.18
COL5A1-207ENST00000469093 PRSS3P2Q8NHM4 247 aa7.71□□□□□ -1.18
COL5A1-207ENST00000469093 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 F2Z2F3 143 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 NTF3P20783 257 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 RPS10P46783 165 aaKnown RBP7.7□□□□□ -1.18
COL5A1-207ENST00000469093 CFAP161Q6P656 301 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 SLC7A5P1Q8MH63 180 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 DPH3P1Q9H4G8 78 aa7.7□□□□□ -1.18
COL5A1-207ENST00000469093 CARHSP1Q9Y2V2 147 aaKnown RBP7.7□□□□□ -1.18
COL5A1-207ENST00000469093 UBE2L6O14933 153 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 APOC3P02656 99 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 ADCYAP1P18509 176 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 AMTP48728 403 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 WDR73Q6P4I2 378 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 SVBPQ8N300 66 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 TSKUQ8WUA8 353 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 GTSF1Q8WW33 167 aa7.69□□□□□ -1.18
COL5A1-207ENST00000469093 SNAPINO95295 136 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
COL5A1-207ENST00000469093 COTL1Q14019 142 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms