RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 UBE2D2P62837 147 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 NRACQ8N912 160 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 TMEM70Q9BUB7 260 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 SMIM2Q9BVW6 85 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 GTSF1LQ9H1H1 148 aa5.66□□□□□ -1.5
HDAC6-216ENST00000468949 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
HDAC6-216ENST00000468949 PLECQ15149 4684 aaKnown RBP5.65□□□□□ -1.5
HDAC6-216ENST00000468949 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
HDAC6-216ENST00000468949 TRAV8-6A0A0B4J262 113 aa5.65□□□□□ -1.5
HDAC6-216ENST00000468949 IGHV1-24A0A0C4DH33 117 aa5.65□□□□□ -1.5
HDAC6-216ENST00000468949 AMTP48728 403 aa5.65□□□□□ -1.5
HDAC6-216ENST00000468949 RAB5BP61020 215 aa5.65□□□□□ -1.5
HDAC6-216ENST00000468949 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
HDAC6-216ENST00000468949 NACAE9PAV3 2078 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 GAS8-AS1O95177 125 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 PKIAP61925 76 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
HDAC6-216ENST00000468949 SMAGPQ0VAQ4 97 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 RNASEKQ6P5S7 137 aaKnown RBP5.64□□□□□ -1.51
HDAC6-216ENST00000468949 BAGE3Q86Y29 109 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 TMEM18Q96B42 140 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 DNAH1Q9P2D7 4330 aa5.64□□□□□ -1.51
HDAC6-216ENST00000468949 TRBV27A0A0K0K1C4 114 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 G0S2P27469 103 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 IQCJQ1A5X6 159 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 ORMDL2Q53FV1 153 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 LELP1Q5T871 98 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 Q8N8P6 123 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 DEFB104AQ8WTQ1 72 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 TMEM243Q9BU79 118 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 Q9UF83 564 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 APLNQ9ULZ1 77 aa5.63□□□□□ -1.51
HDAC6-216ENST00000468949 TRBV6-8A0A0A6YYG3 113 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 K7EMI3 77 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
HDAC6-216ENST00000468949 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
HDAC6-216ENST00000468949 TIRAPP58753 221 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 C21orf62-AS1Q17RA5 79 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 AMMECR1LQ6DCA0 310 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 LYPD5Q6UWN5 251 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 C18orf32Q8TCD1 76 aa5.62□□□□□ -1.51
HDAC6-216ENST00000468949 A0A087WX48 190 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 HSBP1O75506 76 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 TSHBP01222 138 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 S100A12P80511 92 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 LAGE3Q14657 143 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 ESRGQ1W209 222 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 LINC00476Q8WZB0 136 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 TENM2Q9NT68 2774 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 MRPS16Q9Y3D3 137 aaKnown RBP5.61□□□□□ -1.51
HDAC6-216ENST00000468949 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
HDAC6-216ENST00000468949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
HDAC6-216ENST00000468949 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
HDAC6-216ENST00000468949 LY6G6CO95867 125 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 LINC00614P0C842 121 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 GAGE6Q13070 117 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 DGAT2L7PQ6IED9 249 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 CHCHD1Q96BP2 118 aaKnown RBP5.6□□□□□ -1.51
HDAC6-216ENST00000468949 CYSLTR1Q9Y271 337 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 LINC00588Q9Y4M8 146 aa5.6□□□□□ -1.51
HDAC6-216ENST00000468949 LINC01549A6NIU2 74 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 H7C423 109 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 SIVA1O15304 175 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BKO60814 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BJP06899 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BOP23527 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BBP33778 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BDP58876 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BCP62807 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 Q0VG73 95 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST2H2BEQ16778 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-216ENST00000468949 NIT1Q86X76 327 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BHQ93079 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BNQ99877 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 HIST1H2BMQ99879 126 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 CSMD3Q7Z407 3707 aa5.59□□□□□ -1.51
HDAC6-216ENST00000468949 IGLV2-18A0A075B6J9 118 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 TRAV9-2A0A087WT02 112 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 SERF1AO75920 110 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 IGHV3-30P01768 117 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 IGHV3-33P01772 117 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 HBDP02042 147 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 CRPP02741 224 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 IGHV3-30-5P0DP03 117 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-216ENST00000468949 NDUFA6P56556 154 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 TTC32Q5I0X7 151 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 LGALS9CQ6DKI2 356 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 Q6ZN92 141 aa5.58□□□□□ -1.52
HDAC6-216ENST00000468949 NTM-AS1Q6ZSK4 140 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms