RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 Q6ZQT0 140 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 SERP2Q8N6R1 65 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 ODF3Q96PU9 254 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 BLMP54132 1417 aaPredicted RBP1.8□□□□□ -2.12
XRN1-207ENST00000468894 PTPRMP28827 1452 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 CUL9Q8IWT3 2517 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.8□□□□□ -2.12
XRN1-207ENST00000468894 DIP2AQ14689 1571 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 KDM6BO15054 1643 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 LAMC1P11047 1609 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 IFT172Q9UG01 1749 aa1.8□□□□□ -2.12
XRN1-207ENST00000468894 IGKV1D-42A0A075B6H8 117 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 TRAV17A0A0B4J275 112 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 HMSDA8MTL9 139 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 H7C2G1 150 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 TFF1P04155 84 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 EFNA4P52798 201 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 GNG11P61952 73 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 NNATQ16517 81 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 ESRGQ1W209 222 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 SPANXN5Q5MJ07 72 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 NXT2Q9NPJ8 142 aaKnown RBP1.79□□□□□ -2.12
XRN1-207ENST00000468894 CDK12Q9NYV4 1490 aaPredicted RBP1.79□□□□□ -2.12
XRN1-207ENST00000468894 DUOX2Q9NRD8 1548 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 CRYBG1Q9Y4K1 1723 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 COL14A1Q05707 1796 aaKnown RBP1.79□□□□□ -2.12
XRN1-207ENST00000468894 TNRC6BQ9UPQ9 1833 aaKnown RBP1.79□□□□□ -2.12
XRN1-207ENST00000468894 A0A0C4DFX4 3053 aa1.79□□□□□ -2.12
XRN1-207ENST00000468894 UNC13CQ8NB66 2214 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 PLCH1Q4KWH8 1693 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 NESP48681 1621 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 TOP2BQ02880 1626 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 URB2Q14146 1524 aaKnown RBP1.78□□□□□ -2.12
XRN1-207ENST00000468894 LRRC7Q96NW7 1537 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 A0A087WSZ3 146 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 NAP1L6A6NFF2 107 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 CRPP02741 224 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 DEFB103AP81534 67 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 ELOBQ15370 118 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 SPANXN1Q5VSR9 72 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 DYNLRB2Q8TF09 96 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 TMEM141Q96I45 108 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 TRGV9Q99603 122 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 SMIM7Q9BQ49 75 aa1.78□□□□□ -2.12
XRN1-207ENST00000468894 SETXQ7Z333 2677 aaKnown RBP1.78□□□□□ -2.12
XRN1-207ENST00000468894 LOC285556D6RIA3 1793 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 CHD8Q9HCK8 2581 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 DOCK10Q96BY6 2186 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 A0A087WWC5 75 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 SFTA3P0C7M3 94 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 ASAH2BP0C7U1 165 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 MGST1P10620 155 aaKnown RBP1.77□□□□□ -2.13
XRN1-207ENST00000468894 KRTDAPP60985 99 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 MPV17LQ2QL34 196 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 Q6ZS52 159 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 SPTSSBQ8NFR3 76 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 MGST2Q99735 147 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
XRN1-207ENST00000468894 MINOS1-NBL1R4GNA1 71 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 NCOA6Q14686 2063 aaPredicted RBP1.77□□□□□ -2.13
XRN1-207ENST00000468894 ANKRD36CQ5JPF3 1778 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 MYOM1P52179 1685 aa1.77□□□□□ -2.13
XRN1-207ENST00000468894 DNAJC13O75165 2243 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 C1orf167Q5SNV9 1468 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 NRXN1Q9ULB1 1477 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
XRN1-207ENST00000468894 IGHV3-64A0A075B6Q5 118 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 IGHV1-18A0A0C4DH31 117 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 A0A0G2JND7 137 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 CRYM-AS1A6NIL9 109 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 UMAD1C9J7I0 102 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 HCG22E2RYF7 251 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 H7BZZ5 65 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 DSCR4P56555 118 aaPredicted RBP1.76□□□□□ -2.13
XRN1-207ENST00000468894 PMCHL1Q16048 86 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 CFAP126Q5VTH2 177 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 ZNF826PQ6ZT77 177 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 FAM223AQ8IWN6 122 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 BPESC1Q9GZL8 116 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 PARP4Q9UKK3 1724 aaKnown RBP1.76□□□□□ -2.13
XRN1-207ENST00000468894 ARFGEF3Q5TH69 2177 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 SCN7AQ01118 1682 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 MAST4O15021 2626 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 ASXL1Q8IXJ9 1541 aa1.76□□□□□ -2.13
XRN1-207ENST00000468894 ABCA4P78363 2273 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 CDC42BPAQ5VT25 1732 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 WIZO95785 1651 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 TRAV13-2A0A0B4J235 113 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 TCRBV4S1A1TA0A5B7 111 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 E7EUB6 86 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 NDUFC1O43677 76 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 PRB1P04280 392 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 MIFP14174 115 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 DEFB113Q30KQ7 82 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 C9orf116Q5BN46 136 aaPredicted RBP1.75□□□□□ -2.13
XRN1-207ENST00000468894 RPL7L1Q6DKI1 246 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms