RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SMCO1Q147U7 214 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 RNASE10Q5GAN6 216 aaKnown RBP1.47□□□□□ -2.17
XRN1-206ENST00000467077 Q6ZQT7 251 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 CYP2G1PQ6ZSU1 146 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 LINC00305Q7Z4B0 112 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 LHFPL1Q86WI0 220 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 TERB2Q8NHR7 220 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 YIPF6Q96EC8 236 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 C2orf50Q96LR7 162 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 PRADC1Q9BSG0 188 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 SRRQ9GZT4 340 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 GTSF1LQ9H1H1 148 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 FLVCR2Q9UPI3 526 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 C14orf166Q9Y224 244 aaKnown RBP1.47□□□□□ -2.17
XRN1-206ENST00000467077 PXMP4Q9Y6I8 212 aa1.47□□□□□ -2.17
XRN1-206ENST00000467077 IGHV3-73A0A0B4J1V6 119 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 FAM240AA0A1B0GVK7 77 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 H3BP45 60 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 H3BQ15 152 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 M0R2P5 195 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 COX7A2P2O60397 106 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 CD3DP04234 171 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 NMBP08949 121 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 OR5AL1P0C617 328 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 OR10J4P0C629 311 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 SEC11BP0C7V7 166 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 IGLC2P0DOY2 106 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 PSMB2P49721 201 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 POLR2GP62487 172 aaKnown RBP eCLIP1.46□□□□□ -2.18
XRN1-206ENST00000467077 RHOHQ15669 191 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 SPANXN5Q5MJ07 72 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 TMEM78Q5T7P6 136 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 C10orf113Q5VZT2 155 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 FAM104BQ5XKR9 115 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 SPINK6Q6UWN8 80 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 PATE2Q6UY27 113 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 DPPA3Q6W0C5 159 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 LYZL2Q7Z4W2 148 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 BPIFA4PQ86YQ2 179 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 RAB2BQ8WUD1 216 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 ORAOV1Q8WV07 137 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 UBE2WQ96B02 151 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 CNBD2Q96M20 576 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 AGPAT4-IT1Q9H0P7 198 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 SH3BGRL3Q9H299 93 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 NAA60Q9H7X0 242 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 NPVFQ9HCQ7 196 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 NAGKQ9UJ70 344 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 CHTOPQ9Y3Y2 248 aaKnown RBP1.46□□□□□ -2.18
XRN1-206ENST00000467077 TIMM9Q9Y5J7 89 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.18
XRN1-206ENST00000467077 IGHV3-64A0A075B6Q5 118 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 IGKV2-40A0A087WW87 121 aaPredicted RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 A0A087WWC5 75 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 A0A087WX48 190 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 TRAV26-2A0A0B4J265 109 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 IGKV2-24A0A0C4DH68 120 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 TRBV6-4A0A1B0GX49 114 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 ANKRD20A5PA0PJZ0 165 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 PGPA6NDG6 321 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 M0R3E3 92 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 GNRH2O43555 120 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 SYNGR2O43760 224 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 HPGDSO60760 199 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 IGKV2D-40P01614 121 aaPredicted RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 CRPP02741 224 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 HIST1H1EP10412 219 aaKnown RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 AQP4P55087 323 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 RRAS2P62070 204 aaPredicted RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 RPL19P84098 196 aaKnown RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 SLC38A11Q08AI6 406 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 Q0VG73 95 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 PMVKQ15126 192 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 ELOBQ15370 118 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 SURF2Q15527 256 aaPredicted RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 GUK1Q16774 197 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 SDIM1Q6ZPB5 146 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 PRNTQ86SH4 94 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 NIT1Q86X76 327 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 EXOC3-AS1Q8N2X6 119 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 LINC00337Q8N6G1 96 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 ZFAND2AQ8N6M9 145 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 C9orf163Q8N9P6 203 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 TMEM229BQ8NBD8 167 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 Q8TAT8 98 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 ZCCHC13Q8WW36 166 aaKnown RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 SMIM8Q96KF7 97 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 CIB3Q96Q77 187 aaPredicted RBP1.45□□□□□ -2.18
XRN1-206ENST00000467077 SLC39A9Q9NUM3 307 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 ZNF492Q9P255 531 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 COMMD3Q9UBI1 195 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 PRELID1Q9Y255 219 aa1.45□□□□□ -2.18
XRN1-206ENST00000467077 TRBV19A0A075B6N1 114 aa1.44□□□□□ -2.18
XRN1-206ENST00000467077 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.44□□□□□ -2.18
XRN1-206ENST00000467077 PIGBOS1A0A0B4J2F0 54 aa1.44□□□□□ -2.18
XRN1-206ENST00000467077 A0A1W2PNN7 141 aa1.44□□□□□ -2.18
XRN1-206ENST00000467077 FAM25AB3EWG3 89 aa1.44□□□□□ -2.18
XRN1-206ENST00000467077 FAM25CB3EWG5 89 aa1.44□□□□□ -2.18
XRN1-206ENST00000467077 FAM25GB3EWG6 89 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms