RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 MRPL52Q86TS9 123 aaKnown RBP4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 NIT1Q86X76 327 aa4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 ZNRF2Q8NHG8 242 aa4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 TMEM141Q96I45 108 aa4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 WWC2-AS2Q96NR7 200 aa4.73□□□□□ -1.65
ATP2B4-206ENST00000466407 IGHV3-73A0A0B4J1V6 119 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 TRAV8-6A0A0B4J262 113 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 A0A1B0GUV1 79 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 DEFB4AO15263 64 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 SERF1AO75920 110 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 IFI27P40305 119 aaPredicted RBP4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 AMTP48728 403 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 MRPS36P82909 103 aaKnown RBP4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 RNASEKQ6P5S7 137 aaKnown RBP4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 ERASQ7Z444 233 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 C20orf203Q8NBC4 194 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 TOMM6Q96B49 74 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 UPK3BQ9BT76 320 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 TMEM243Q9BU79 118 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 TGP01266 2768 aa4.72□□□□□ -1.65
ATP2B4-206ENST00000466407 A0A096LPF7 62 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 SMKR1H3BMG3 65 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 UBE2L6O14933 153 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 LEPROTL1O95214 131 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 NUDT3O95989 172 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 TSHBP01222 138 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 CCL18P55774 89 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 NDUFA6P56556 154 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 SEC11AP67812 179 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 GAGE1Q13065 139 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 GAGE4Q13068 117 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 GAGE5Q13069 117 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 Q6ZN92 141 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 Q6ZSN1 163 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 SPATA12Q7Z6I5 190 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 C10orf126Q8N4M7 172 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 COL7A1Q02388 2944 aa4.71□□□□□ -1.66
ATP2B4-206ENST00000466407 TRAV12-1A0A0B4J245 112 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 LOC389332A0A1B0GUA5 103 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 C20orf202A1L168 122 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 P0DMU3 169 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 FAM231AP0DMU4 169 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 FAM231CP0DMU5 169 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 HTN3P15516 51 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 PDZD11Q5EBL8 140 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 HIST3H2BBQ8N257 126 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 TMEM101Q96IK0 257 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 MRPS16Q9Y3D3 137 aaKnown RBP4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
ATP2B4-206ENST00000466407 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 DGAT2L7PQ6IED9 249 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 MUC7Q8TAX7 377 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 URB1-AS1Q96HZ7 61 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 C2orf88Q9BSF0 95 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 MAP1LC3CQ9BXW4 147 aa4.69□□□□□ -1.66
ATP2B4-206ENST00000466407 TRAV9-2A0A087WT02 112 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 A0A0J9YY99 117 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 GAS8-AS1O95177 125 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 LINC00310P59036 64 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 TTC32Q5I0X7 151 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 LINC01556Q5JQF7 62 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 AMMECR1LQ6DCA0 310 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 LGALS9CQ6DKI2 356 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 LYPD5Q6UWN5 251 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 OR5A1Q8NGJ0 315 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 IFI27L1Q96BM0 104 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 SCGB3A1Q96QR1 104 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
ATP2B4-206ENST00000466407 A0A087WX48 190 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 A0A096LNJ9 63 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 TRAV8-4A0A0B4J246 113 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 IGLL5B9A064 214 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 FGF6P10767 208 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 PLNP26678 52 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 PMVKQ15126 192 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 PMCHL1Q16048 86 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 TEX43Q6ZNM6 134 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 FAM19A3Q7Z5A8 133 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 CHCHD5Q9BSY4 110 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 UBE2D4Q9Y2X8 147 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
ATP2B4-206ENST00000466407 DYNC2H1Q8NCM8 4307 aaKnown RBP4.66□□□□□ -1.66
ATP2B4-206ENST00000466407 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
ATP2B4-206ENST00000466407 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
ATP2B4-206ENST00000466407 NTM-AS1Q6ZSK4 140 aa4.66□□□□□ -1.66
ATP2B4-206ENST00000466407 LINC01561Q8N1V8 128 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms